Halostagnicola larsenii: HALLA_05780
Help
Entry
HALLA_05780 CDS
T03008
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_05780
Enzymes [BR:
hlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALLA_05780
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HALLA_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
Cas_Cas4
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHG00726
UniProt:
W0JPS5
LinkDB
All DBs
Position
complement(201200..204823)
Genome browser
AA seq
1207 aa
AA seq
DB search
MPYLTNPEEAPSVFDDEPQSQVFDEYFEGSGRVVVGAGAGTGKTTTLIDIVAETILQKLE
TEDGNPMDDLLVTTFTKDAAGELKTELKQRLRLHEEETGEDLDTDIWRWIETDSYIETID
SFTQRLLREVAVDAGVSPDFDIRNGLEDEDLVDEIMADLRENPEHAERLDRLEDAYPNQD
WQDYPPRDVQTMLTDAHEKSREFCWTPEEMGDQLLETHRASHANIEPAFTAEDIRDITQD
ITGQYPIVPENLPEHASQVHEHNEQLLEDFKQLLIAYDELYDEKTLDSGALSYTDITDLV
WRYLNQNPESEWAQGLGERFDHIFIDEFQDTSFAQCRILSYCFPDSDSLDGPNALFIGDV
KQSIYQWRSADPRIFSEIIQDAQAGEADEYLEVEGLEYRPLTTNFRSHPDLVEAANHVFD
QVFDYSERGDIGPFPIPFEAATAERVSTEPDWAETTSVNDEQALARLHVMDLGSPQNKDD
WWQTEAQQIAMTVAEITDNDQVPVLDTDATESLDDPQYRRAEPGDITLLFNRRRAMPQYA
DALRQYGVECAIDVSAGLFDEPEVRLLVDVLDWFANPHQKDSLIRILRSPVTALEDRTIR
YLASENYYLSTALRNWPEDLPEADRERLEGLLALRNDLRWDREKNKAELVSELIQHTAFD
SIVLADTDGKQKFANLWLITEIATEWEDEELMTYREFVVRLKRLRERARRGEEEYPVAKI
SDENSDTTVRLTTVHRSKGLEYPVVILPDLHFSPPGGLFPWDNRMLLSRDGVGIRPDIGN
ETPVHFDQGGSDFWLTDNYTPFAPATDGLGTTWLRGNRSMNVPMDDNHPLTDNIYAEIAE
FWRTLYVAYTRASDHLIFGLTDTVLWPYDENFSWAPLLRERLQPNGLDGWRDGVFARAID
YNELEGTEQVWIGIDDLDTGTPIEDEPIGMDTIDEAITEDQRHELEPIDPDFFPEVVRPS
TIQELLACPLRFQYSELEEVSGIRAKIPPGSSPPGNLQRSQWGDLVHLFLENYHEDPEEA
EELARTYSSEIQSELLEEVQENFATSDIASRIEADADEVLPEHEVLTYAPELETYIRGQI
DLLFEDSDGWHIVDYKTGRVADEEEYSGQMYRQQLAAYRWLAETAYDIEITSTELLYIHP
DVERSSVEVEAEEFETLLTTARDSLDVIPDQGLPADPNPTPDETNSPDETTRCGSCPYLD
ICPEWSD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgccatatctcacgaatcccgaagaagcgccgtcggtgtttgacgacgaaccgcagagc
caggtgttcgatgagtatttcgaagggagtggtcgcgtcgttgtcggggctggcgccgga
accgggaagacaacgacattaatcgatattgtggcggagaccattctccaaaagttggag
acagaggatgggaatccgatggatgatctcttagtgacaacgttcacgaaggacgctgca
ggtgaattaaagacagaactcaaacaacggctgcggctgcacgaagaggaaactggcgaa
gatctcgataccgatatctggcgttggattgaaaccgatagctatatcgaaacgatcgac
tcgttcacgcagcgactcctccgggaagttgcggtcgatgctggtgtgtcaccggatttc
gacatccgaaatggtctcgaagacgaagacctggtagacgagattatggctgatcttcgg
gagaatcctgaacatgcagaacgtttagatcggttagaagacgcgtacccaaaccaggat
tggcaggactacccaccgcgtgacgttcagacgatgctgaccgacgctcatgaaaaaagc
cgtgagttctgctggacacctgaagagatgggcgaccagcttcttgagacccatcgagca
tcacatgcaaacattgaaccggcatttactgcagaagatatccgtgacatcacccaagat
attactggacagtaccctattgttccagaaaatctgccagagcatgcgtcacaggttcac
gaacacaatgaacagctgcttgaagacttcaaacagctgctgatcgcttacgacgagcta
tatgacgaaaaaactctcgactcaggagcactctcctatacagatatcacggatttggtc
tggcgatatctcaatcaaaatccagagagcgaatgggcacagggcctcggagagcggttt
gaccatattttcatcgacgaatttcaggacacaagcttcgcacaatgtcggatactatct
tattgtttccctgattcagactctcttgacggaccgaatgctctgtttattggtgacgtc
aaacagtcaatctatcagtggcggtcagcggatccgcgaatcttctcagagattattcag
gacgcacaagcgggagaggccgatgagtatctcgaggttgaaggcttagagtatcggccg
ctgacgacaaacttccgaagccatccggacctcgttgaagctgccaaccatgtgtttgat
caggtgtttgactattccgagcgtggtgacatcggtccgttcccgatcccgtttgaagcg
gcgacagctgagcgcgtgtcaactgaacccgactgggcagagacaacctcagtgaacgat
gaacaagccttggcacggcttcacgttatggacctgggcagtccacagaataaggatgac
tggtggcagacagaagcccagcaaatcgcgatgacagtggccgaaatcaccgacaacgat
caggtccccgttctcgatacggatgcaaccgaatctcttgatgacccacaataccgacgg
gcagaacccggtgatataaccctcctatttaatcggagacgcgccatgcctcaatatgcg
gacgcactccgtcagtacggggttgaatgtgcaatcgacgtttcagccgggttgtttgat
gaacccgaggttcggcttctggtggatgtcctggactggttcgcgaacccacatcagaag
gattcgctgatacggattctacggtcacctgtcactgcccttgaagaccgaactattcgc
tatctcgcaagtgagaactactacctctcgacagcgcttcgcaactggccggaggactta
cctgaggccgatcgcgagcggcttgagggtctgctagctcttcgcaacgacctacgctgg
gaccgcgaaaagaacaaggctgagcttgttagtgaactcattcaacatacggcgttcgac
tcaattgtcctagcggacacagacggcaaacaaaagtttgcgaacctctggctgatcacg
gagatcgcgacggagtgggaagacgaggagctgatgacgtatcgcgagttcgtagttcgc
ctcaagcgattgcgagagcgagcacgacgcggtgaagaagagtatccagtagcgaagatt
tcggatgaaaattccgacacgacagttcggctgacaactgtacatcggtcgaaaggactg
gaatatccggtcgttatacttcctgaccttcacttttcgccgccaggaggtctgttcccg
tgggacaaccgaatgttactaagtcgtgacggagttggaatcaggccagacatcggtaat
gaaactccggttcatttcgaccagggaggatctgacttctggctaaccgacaactacact
ccattcgcgcccgctacggatgggcttggtacaacctggctacgtgggaaccgcagtatg
aatgtccccatggatgataaccatccacttaccgataacatctatgccgaaatcgctgaa
ttctggcggaccctctatgtagcttacaccagagcttccgaccaccttattttcggactc
accgatacggttctctggccgtatgatgaaaactttagctgggcaccactcctccgagaa
cgtctgcaaccaaatgggttggatggctggcgggacggcgtcttcgcccgggctatcgac
tataacgaattagaggggacagaacaggtctggatcggtatcgacgatttggacaccgga
accccgatagaagacgagccaatcgggatggatactatagatgaagccattacggaagat
cagcgccacgaactagagccaatcgatccggacttcttccccgaagtcgttcgcccaagc
acaattcaggagttgctcgcgtgcccgcttcggttccaatacagcgaattagaggaggtt
agtggtatccgcgctaagataccgccagggagttcaccgccaggtaatcttcaacgcagt
cagtggggtgatcttgttcaccttttccttgaaaactaccacgaggacccagaagaggcc
gaggagcttgctcgaacatattcatcggagatacagtccgaacttcttgaggaggtacaa
gagaacttcgcgacatctgatattgccagccgaatagaagccgacgcagacgaggtgctt
ccggaacatgaagtactcacctacgctccagagttggagacatatatccgtggtcagatt
gatctcctctttgaagacagcgacggctggcacattgtcgattataagacaggccgagtc
gcagacgaagaggaatactccggacagatgtatcgtcaacagttagccgcgtatagatgg
ctagcagaaaccgcgtacgacatcgagatcacctcgacagaactactctatattcatccg
gatgttgaaaggagttctgtggaagttgaggcggaggaattcgagacattactcacaacc
gctcgtgattcattggatgtcatcccggaccaaggattaccagcggatccaaatcccacc
cctgatgaaacgaattcgcctgatgaaaccacacggtgcgggtcatgtccgtatctggat
atctgtcctgagtggtctgattag
DBGET
integrated database retrieval system
