Halostagnicola larsenii: HALLA_07555
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Entry
HALLA_07555 CDS
T03008
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hlr03036
]
HALLA_07555
Chromosome and associated proteins [BR:
hlr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HALLA_07555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
Crescentin
Tropomyosin
AAA_29
AAA_15
DUF1664
EzrA
ATG16
AAA_13
Fib_alpha
MscS_porin
TPR_MLP1_2
DUF3450
CENP-F_leu_zip
TMPIT
GAS
UPF0242
Laminin_II
Baculo_PEP_C
DUF4407
Exonuc_VII_L
ATG14
Fez1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AHF98731
UniProt:
W0JN49
LinkDB
All DBs
Position
546643..550215
Genome browser
AA seq
1190 aa
AA seq
DB search
MYIKALVLDGFKSFGRKTKIPFYEDFTVITGPNGSGKSNIIDAVLFALGLARTRGIRAEK
LTDLIYNPGHEDGDNSGGPREATVEVVLDNSDGTLERSQVVNAAGSDDVGDCEEVRIRRR
VKETEDNYYSYYYLNDRSVNLSDIQDLLAQAGVTPEGYNVVMQGDVTEIINMTPYNRRGI
IDEIAGVAEFDAKKEDAFEELEVVQERIDEAELRIEEKRERLSQLEDERQTALRYRRLRR
EKEEYEGYRKASELEEKREELENVQDRVEGLEDDLEDLQRELDERQGKVVRLQEDLEDLN
AEIERKGEDEQLRIKSEIEEVKGDISRLEDKIESSEEQIESAESDRREAFVQIDRKQEQV
EDLTSEMREHKLEKASIKSEIQERETEREELQAEIDAVDTEYDEVKAELQERKETLEEEK
TEKNDLQREQDRLLDEARRRSNAISEKEETIEETEVELPELESQRSDLERELEKAEKNRQ
SIEGVVDDLKGEKRRLQDDLDDLDDDIQAKQAEYAELEANAGESGDSSFGRAVTTILNSG
IDGLHGAVAQLGTVPGEYATACETAAGGRLANVVVDDDVIGQQCIEYLKSRNAGRATFLP
ITKMRERNLPSAPSDPGIVGFAYNLVDFDDQYAGIFSYVLGDTLVVEDIETARSYMGDYR
MVTLDGDLVEKSGAMTGGSRKGSRYSFSGGGKGQLERVAKEITELQDERESVREELRGVE
DRLDDARDRQTDANDEVRSIESKLEGIEESREDLEDDIDRLEDELEELREERESVDERMT
EISGDIEDQQAEIAEIESDIDELEAELADSKIPELTAQIDDLDEEIDEREDKIDDLDGKL
NELELEKQYAEDAIEDLHDDIETAQNRKAEHEEKIESFEESIEDKRDVLADKREAVEELE
EELTELKEDRRELKEELGEAKTARDQQQDRVNTVESKLEDNRERAGDLEWELEALEEEVG
DYDPEDVPDHETVLEMIDLLEADMEALEPVNMLAIDEYDEVRTDLENIEEGRNTLVEEAD
GIRERIDQYESQKKQTFMDAYESIAEHFTDIFEKLSEGTGSLHLENEEDPFEDGLTMKAQ
PGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEIDAFLDAVNAERVGQMVDE
LAGDAQFVVVSHRSAMLDRSERAIGVTMQQNNVSAVTGIDLNSEEVPADD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaggcgctcgttctggacggtttcaagagcttcggccgcaagacgaaaatt
ccgttttacgaggactttacggttatcaccggcccgaacggctccgggaaatcgaacatc
atcgacgccgtcctcttcgcgctggggctcgctcggacccgcggcatccgcgccgagaag
ctcaccgatctgatctacaatcccggccacgaggacggcgacaacagcggcggcccgcgc
gaggcgaccgtcgaagtcgtcctcgacaactccgacggcaccctcgagcgctcgcaggtg
gtcaacgcggcgggcagcgacgacgtcggcgactgcgaggaggttcgcatccgccggcgc
gtcaaggaaaccgaggacaactactactcctactactatctgaacgaccgctcggtcaac
ctctcggatattcaggacttactcgcacaggccggcgtcaccccggaagggtacaacgtc
gtcatgcagggcgacgtgaccgagatcatcaacatgaccccctacaaccggcgggggatc
atcgacgagatcgccggcgtcgccgagttcgacgcgaaaaaggaagacgccttcgaggaa
ctcgaggtcgtccaggagcggatcgacgaggccgaacttcggatcgaggaaaaacgcgaa
cgattgtcccaactcgaggacgagcgccagaccgccctgcgataccgacggctccgccgc
gagaaagaggagtacgagggctaccggaaggccagcgaactcgaggagaaacgcgaggaa
ctcgagaacgttcaggaccgggtcgaggggctcgaggacgacctcgaggatctccagcgc
gaactggacgaacggcaggggaaagtcgtccgcctgcaggaggatctcgaggatttgaac
gccgaaatcgagcgcaagggcgaagacgagcagctgcgcatcaaaagcgagattgaggag
gtcaaaggcgacatctcccggctcgaggacaagatcgaatccagcgaggagcagatcgag
tcggccgaatccgatcggcgcgaggcgttcgtccagatcgaccgcaaacaggagcaagtc
gaggacttaacgagcgagatgcgcgagcacaaactcgagaaggcctccatcaaatccgag
attcaagaacgcgagacggaacgcgaggagctacaggccgagatcgacgctgtcgacacg
gagtacgacgaggtcaaggccgaattacaggagcgaaaggaaaccctcgaggaggaaaaa
accgagaagaacgacctccagcgcgagcaggatcgcctgctcgacgaggcgcgtcggcgc
tcgaacgccatcagcgagaaagaggagacgatcgaggagaccgaagtcgaactccccgaa
ctcgagagccagcgctcggacctcgaacgcgaactcgagaaggccgaaaagaatcgccag
agcatcgagggcgtcgtcgacgacctcaaaggcgagaaacgccgcctacaggacgactta
gacgacttagacgacgacattcaggccaagcaggccgagtacgcagagctcgaggccaac
gcgggagaaagcggcgactcgtcgttcggacgcgccgtcacgacgattctcaattcgggg
atcgacggcttacacggggcggtcgcccagttagggacggtgccgggcgagtacgcaacg
gcctgtgaaaccgccgcaggtggtcggctcgcgaacgtcgtcgtcgacgacgacgtgatc
ggccagcagtgtatcgagtacctcaaatcgcgcaacgccggccgggcgacgttcctcccg
atcacgaagatgcgcgagcgaaacctgccgagcgcgccctcggatccgggaatcgtcggc
ttcgcgtacaacctcgtcgacttcgacgaccagtacgccggcatcttctcgtacgtcctc
ggcgacacgctcgtcgtcgaggatatcgagacggctcgctcgtacatgggcgactaccgg
atggtcaccctcgacggcgacctcgtcgagaaaagcggcgcgatgaccggcggctcccga
aaaggatcgcgatactccttctccggcggcggcaagggccaactcgagcgcgtcgcaaag
gagatcaccgagttgcaggacgaacgcgaatcggttcgtgaggagcttcgcggcgtcgag
gatcgactcgacgacgcgcgagaccgccagacggacgccaacgacgaagtgcggtcgatc
gagtcgaaactcgagggcatcgaggagagccgggaggatctcgaggacgacatcgaccgc
ctcgaggacgaactcgaggagctacgcgaggagcgcgagtccgtcgatgagcggatgacc
gagatttcgggcgacatcgaggaccaacaggccgagatcgcggagatcgagtccgatatc
gacgaactcgaggccgaactcgcggactcgaagattccggaactcacggcgcagatcgac
gacctcgacgaggagatcgacgagcgcgaggacaagatcgacgacctcgacgggaagctc
aacgaactcgaactcgagaagcagtacgcagaagacgcgatcgaggacctccacgacgac
atcgagacggcccagaaccgcaaggccgaacacgaggagaagatcgagtcgttcgaggag
tccatcgaggacaaacgcgacgtcctcgcggacaaacgcgaggcggtcgaggaactcgaa
gaggagttgaccgaactcaaagaagaccgccgcgaactcaaagaggaactcggcgaggcc
aagacggcccgcgatcaacagcaagatcgggtcaacaccgtcgagagcaaactcgaggat
aaccgcgagcgggccggggacctcgagtgggaactcgaagcgctcgaagaggaggtcggc
gactacgatcccgaagacgttccggaccacgagaccgtcctcgagatgatcgacctgctc
gaggcggacatggaagccctagagcccgtgaacatgctcgcgatcgacgagtacgacgag
gttcggaccgatctcgagaacatcgaggagggcaggaacacgctggtcgaggaggcggat
ggcatccgcgagcggatcgaccagtacgaatcccagaagaaacagacgttcatggacgcc
tacgagtcgatcgccgagcacttcacggacatcttcgagaagctctcggaggggaccggc
tcgttgcacctcgagaacgaggaggacccgttcgaggacgggctgacgatgaaggcccag
ccgggcgacaagccgatccagcgtctggacgcgatgtccggcggggagaagtccttgacc
gcgctcgcctttatcttcgcgatccagcgacacaaccccgcgccgttctacgcgctcgac
gagatcgacgccttcctcgacgcggtcaacgcagaacgcgtcggccagatggtcgacgaa
ctcgcgggcgacgcccagttcgtcgtcgtctcccaccgttctgcgatgctcgatcgctcc
gagcgggcgatcggggtgacgatgcaacagaacaacgtgagcgcggtgacgggcatcgac
ttgaacagtgaggaggtgccggcggatgactga
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