Halostagnicola larsenii: HALLA_08005
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Entry
HALLA_08005 CDS
T03008
Name
(GenBank) peptide ABC transporter permease
KO
K02034
peptide/nickel transport system permease protein
Organism
hlr
Halostagnicola larsenii
Pathway
hlr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HALLA_08005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hlr02000
]
HALLA_08005
Transporters [BR:
hlr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HALLA_08005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF3165
Motif
Other DBs
NCBI-ProteinID:
AHF98813
UniProt:
W0JJP8
LinkDB
All DBs
Position
638113..639189
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AA seq
358 aa
AA seq
DB search
MTDKQSGRGRIRIHGFESERDGARDGPTHRTRLPREDSVDWGSDARTEPTTRWRRDLSRF
ARNREALVGLLIVLSMAVLSIFARPIELWGLTVQPVSLAPYSPSEILWLTQDVSPYDPPS
LAHPMGVDGEGRDVFSRVLTGGRYSISIGLVVVTITSVIGIVYGSISGYYGGWVDELLMR
FVDVILAFPGLVLALVVVALFESGYWQLVVAFSVFGWAGYARVIRGEVLSVKESEYVLAA
KALGAGDRSVLFRHVVPNAAPPVIVLATLNIGTVVIGVAALGFLGLGLSPATAEWGTMLE
GARDAIIQGPGGDARWWVTVFPGGAIFVFVLSINLIGDAINETLDARGTDSATRTELR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaacaatccggtcgcggccgaattcggatccacggattcgaatccgaacgc
gacggcgctcgagacggaccgactcaccggacgagacttcctcgagaggattcggtcgat
tggggctcggacgcacgaaccgagccgaccacgcgctggcggcgcgacctctcgcggttc
gctcgaaaccgcgaggcgctggtgggactcttgatcgtcctctcgatggcggtcctttcg
atcttcgcccggccgatagaactctggggtctgacagtccagccggtttcgctggcgccg
tattccccctcggaaatcctctggctcacccaggacgtctcgccctacgacccgccgtcg
ctggcgcacccgatgggcgtcgacggcgagggacgcgacgtcttttcgcgggtgctgacc
ggcggtcgctacagcatctcgatcgggctcgtcgtcgtcacgatcacgagcgtgatcggc
atcgtgtacggctccatctccggctattacggcggctgggtcgacgaactcctgatgcgg
ttcgtcgacgttatcctcgcgtttccggggctcgtcctggcgctggtcgtcgtcgcgctg
ttcgagagcggctactggcaactggtcgtcgcgttctccgtgttcggctgggcggggtac
gctcgagtcatccgcggggaagtactctccgtcaaagaatcggagtacgtcctcgcggcg
aaagcgctcggggccggcgatcgatcggtgctgttcaggcacgtcgtgcccaacgccgcc
ccgccggtcatcgtcctcgcaacgctcaacatcgggacggtcgtcatcggcgtggccgcc
ctcggctttctcggcctcggcctgtcgccggcgaccgccgagtgggggacgatgctcgag
ggcgctcgagacgcgatcatccaaggaccgggcggcgacgctcgctggtgggtgacggtc
ttccccggcggcgcgattttcgtcttcgtgctgtcgatcaacctgatcggcgacgccatc
aacgagacgctcgacgcccgcggaaccgactcggcgacccgaaccgaattgcgatga
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