Halostagnicola larsenii: HALLA_08240
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Entry
HALLA_08240 CDS
T03008
Name
(GenBank) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlr03016
]
HALLA_08240
Enzymes [BR:
hlr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
HALLA_08240
Transfer RNA biogenesis [BR:
hlr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
HALLA_08240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
End_beta_propel
SHS2_FTSA
Motif
Other DBs
NCBI-ProteinID:
AHF98854
UniProt:
W0JNW8
LinkDB
All DBs
Position
complement(676505..678166)
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AA seq
553 aa
AA seq
DB search
MSTDTPDPTETEAFERVCETLVERIINGEVEREEVEKAKLEACSEHSAPKVPKNSELLDY
APQEYREDLESVLQRKPVRTASGVSPVAIMTSPERCPHGKCLYCPGGPDSEFSSSQSYTG
EEPAAARGVQNDYDPYGQVTLRLEQLREIGHPIDKVELILMGGTMTARSHDYQEWFVKRA
LEAMNDYDVDKEPEPAQGVSFAEDPEEYEWKYLEDVIAENETGDIRNIGTTFETKPDWCD
PEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGVQESIEANQRLRDAAFKVGFHMMPG
QPGMSREMCLEDFRRIFEQEQWKPDYLKIYPTLIVRGTATYDWWHRGEYDPLDNEEAAEL
VAEIKDMIPRYTRLQRVQRDIPADYIDAGVWKSNLRQLARKRMDEHGWECECIRCREAGM
NDAEPDQVELDVMTYEASGGTEHFISFEDFEQDLLIGFCRLRFPNDPVRGELENAALVRE
LHVYGSEVTMGEDGETDQHQHRGYGRKLMNRAESLAADAGFDKVSVISGIGAREYYRNKL
GYHQDGPYVSKRL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccgacacgcccgacccgaccgaaaccgaagcgttcgagcgggtctgtgaaacg
ctcgtcgagcggatcatcaacggcgaggtcgagcgcgaggaggtcgagaaggccaaactc
gaggcctgctcggagcactcggcaccgaaagtgcccaaaaactccgagctgctagattac
gctccccaggagtaccgcgaggacttagaatcggtcctccagcgcaaaccggtccgaacc
gcctccggcgtctcgccggtggcgatcatgacctcgcccgagcgctgcccgcacgggaag
tgtctgtactgtcccggcggtccggactcggagttctcgagttcccagagctacacgggc
gaggagccagcagccgcccgcggcgtacaaaacgactacgacccctacgggcaggttacc
cttcgactcgagcagttgcgagagatcggccatccgatcgacaaggtcgagttgatcctc
atgggcggcacgatgaccgcccggagccacgactaccaggagtggttcgtcaagcgagcg
ctcgaggcgatgaacgactacgacgtggacaaggagcccgaacccgcccagggcgtgagc
ttcgcggaggatcccgaggagtacgagtggaagtatctcgaggacgtcatcgcggaaaac
gagacgggcgacatccggaacatcgggacgaccttcgagacgaaacccgactggtgcgat
cccgagcagatcgaccggatgctggacctcggcgggacgaaagtcgaggtcggcgtccag
acgacctacgagcggatcaaccgcgagatgcaccgcggccacggcgttcaggagtcgatc
gaggcgaaccagcgactgcgggacgcggcgttcaaggtcggattccacatgatgcccggc
cagccgggaatgagcagggagatgtgtcttgaggacttccggcgcatcttcgaacaggag
cagtggaagcccgactacctgaagatatatccgacgctgatcgtccgcgggacggcgacc
tacgactggtggcacagaggcgagtacgacccgcttgacaacgaggaagccgcggaactc
gtcgccgaaatcaaggacatgatcccgcgctatacgcggctccagcgggtccaacgggac
attccggcggactacatcgacgccggcgtctggaagtcgaacctccggcaactcgcgcga
aagcggatggacgaacacggctgggagtgtgagtgtatccgctgtcgcgaggccgggatg
aacgacgccgaacccgaccaggtcgaactcgacgtcatgacctacgaggcgagcggcggg
accgaacacttcatcagcttcgaagacttcgaacaggacctcctgatcggtttctgccgg
cttcgattcccgaacgaccccgtcagaggcgaactcgagaacgcggcgctagtcagggaa
ctgcacgtctacggctcggaagtcacgatgggcgaggacggcgagacggaccaacaccaa
catcgcggctacggccgcaagctgatgaatcgggccgaatcgctggccgccgacgccggc
ttcgacaaagtgagcgtcatctcgggtatcggcgctcgagagtactaccggaacaaactc
ggctatcatcaggacgggccgtacgtgagcaaacggctgtga
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