Halostagnicola larsenii: HALLA_08855
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Entry
HALLA_08855 CDS
T03008
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hlr
Halostagnicola larsenii
Pathway
hlr00100
Steroid biosynthesis
hlr00909
Sesquiterpenoid and triterpenoid biosynthesis
hlr01100
Metabolic pathways
hlr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
HALLA_08855
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
HALLA_08855
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hlr01006
]
HALLA_08855
Enzymes [BR:
hlr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
HALLA_08855
Prenyltransferases [BR:
hlr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
HALLA_08855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF357
Motif
Other DBs
NCBI-ProteinID:
AHF98959
UniProt:
W0JP65
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All DBs
Position
786857..787903
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AA seq
348 aa
AA seq
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MTSGQHELTTDADFEWCFEAVHGVSRTFSITIDRLEEPMAGHICVGYLLCRIADTIEDAG
HIPAETQTELLDSYDRLLDPADDLAVEQFMDDVEPWIPEETTDDWEVVAQTPRVLETFDA
LEDEPREIMREPVRELVGGMAMFTSRYADEGGLRLQTVEELEEYCWYAAGTVGTLITGLV
ARGVSTERAEEMRNNARSFALLLQLVNIAKDVETDYREENNVYLPAEWLEEENVPVEDVT
HEDNQSGVTNVIKRVTRRAENYLDDAHRYLEIIPEHRGNKLSAWAIPYLLAVGTMRELRE
RPEDVVRNGDVKVSRAEVYELIQTFEDDVSRAGVGALRSEMAEKPLHQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgggccagcacgaactgacgacggacgccgatttcgagtggtgtttcgaggcc
gtacacggggtctcacggacgttctcgataactatcgaccgactcgaggaaccgatggcg
ggacacatctgtgtcggctacctactctgtcgaatagctgatacgatcgaggacgcgggc
cacattcccgccgagacccagacggaactcctcgattcgtacgaccgactcctcgacccg
gcggacgacctcgcagtcgagcagttcatggacgacgtcgagccgtggattcccgaggaa
accaccgacgactgggaggtcgtcgcccagacgccgcgagtcctcgaaaccttcgacgcg
ctcgaggacgaaccgcgcgagatcatgcgagaaccggttcgggaactcgtcggcgggatg
gccatgttcacgagccggtacgccgacgagggtggactccgcctgcaaaccgtcgaggaa
ctcgaggagtactgctggtacgcggccggaacggtcgggacgctcatcaccggtctcgtc
gcccgcggtgtctccacggaacgagccgaggagatgcgcaacaacgctcggtcgttcgcg
cttctcttgcaactggtcaacatcgcgaaagacgtcgagaccgattaccgcgaggagaac
aacgtctacctccccgccgagtggttagaagaagaaaacgtgcccgtcgaggacgtcact
cacgaggacaaccaaagcggcgtcacgaacgtcatcaaacgcgtcaccaggcgcgctgaa
aattacctcgacgacgcccaccgctacctcgagatcatccccgaacaccgcggcaacaag
ctctcggcgtgggcgatcccgtatctgctggcagttggaaccatgcgcgaactccgcgaa
cggcccgaagacgtcgtccgtaacggcgacgtcaaggtttctcgcgctgaagtgtacgaa
ctcatccagacgttcgaggacgacgtctcgagagccggtgtcggagcgcttcgaagcgag
atggcagagaaaccgctccaccagtaa
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