Halostagnicola larsenii: HALLA_09180
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Entry
HALLA_09180 CDS
T03008
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hlr
Halostagnicola larsenii
Pathway
hlr00020
Citrate cycle (TCA cycle)
hlr00190
Oxidative phosphorylation
hlr00650
Butanoate metabolism
hlr00720
Carbon fixation pathways in prokaryotes
hlr01100
Metabolic pathways
hlr01110
Biosynthesis of secondary metabolites
hlr01120
Microbial metabolism in diverse environments
hlr01200
Carbon metabolism
Module
hlr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hlr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hlr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HALLA_09180
00650 Butanoate metabolism
HALLA_09180
09102 Energy metabolism
00190 Oxidative phosphorylation
HALLA_09180
00720 Carbon fixation pathways in prokaryotes
HALLA_09180
Enzymes [BR:
hlr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HALLA_09180
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
HI0933_like
FAD_oxidored
Thi4
FAD_binding_3
AlaDh_PNT_C
Pyr_redox_3
NAD_binding_7
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AHF99021
UniProt:
W0JNZ4
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Position
852001..853845
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AA seq
614 aa
AA seq
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MYEHDVIVVGAGGAGLRAAVAANEAGADVAMVTKLHPVRSHTGAAEGGINAALREGDDWE
LHAYDTMKGSDYLGDAPAVETLAQDAPEETISLEHWGMPFSREDDGRVSQRPFGGLSFPR
TTYAGAETGHHLLHTMYEQVVKRGIQVYDEWYVMNLATSDEPDPNDRTCHGVVAYDVQSG
QVEGFKANDGVILATGGPGQAFDHTTNAVSCTGDGHAMAYRAGVPLEDMEFIQFHPTTLP
STGVLLSEGVRGEGGILYNNEGERFMFEHGYANNDGELASRDVVARAELTEVSEGRGVED
EYVHLDMRHLGEERILDRLENILHLAEDFEGADGLVEPMPVKPGQHYAMGGIETDENGAT
CVDGLYAAGECACVSVHGANRLGGNALPELIVFGKRAGYHAAGGDLGEAEIETGYTDSVE
EEDDTEFPVQPGSAGLEPAGDDVAADGSGQVTDADGVLQRAVETESERIDRLMNKDNGVQ
HAEIRSKLQKAMTDYVNVFRTEEGIKQALEIIRECREEYRDVYVADPSTTFNTDLQMTYE
TRNLIDVAETIALGALVRNEFRGAHWRQENQIRDDENWLKHTLVSWNAGKPSIWYRPVIL
EGESKKYEPKERSY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaacacgacgtaatcgtggtcggcgcgggcggtgccggcctcagggcagcggtc
gcggcgaacgaggcgggagcggacgtggcgatggtcacgaagcttcacccggttcggagc
cacaccggcgcggcggagggcggtatcaacgccgcgcttcgcgagggcgacgactgggaa
ctccacgcctacgacacgatgaaagggtcggactacctcggggacgcgccggcagtcgaa
acgctggcacaggacgcgcccgaggagacgatttctctggagcactggggaatgcccttc
tctcgagaggacgacggtcgcgtctcacagcggccgttcggtggcctatccttcccgcga
acgacctacgcgggcgcagagacgggccatcacctgctgcacacgatgtacgagcaggtc
gtcaaacgcggtattcaggtctacgacgagtggtacgtgatgaacctcgcgacctccgac
gagccggatccgaacgatcggacctgccacggcgtcgtcgcctacgacgtgcagtcgggt
caggtcgagggattcaaagcgaacgacggcgtgattctcgcgaccggcggtcccggacaa
gcgttcgatcacaccaccaacgccgtctcctgtaccggcgacggccacgcgatggcatat
cgtgcgggcgtcccgctcgaggacatggagttcatccagttccatccgacgacgcttccc
tcgaccggcgtgctcctctcggaaggggttcgcggcgagggtggcatcctctacaacaac
gagggcgaacggttcatgttcgagcacggctacgcgaacaacgacggcgaactcgcctct
cgggacgtcgtcgcgcgggctgagctgacggaagtcagcgagggtcggggcgtcgaagac
gagtacgtccacctcgacatgcgccacctcggcgaggagcggatcctcgaccgcctcgag
aacattctccacctcgcggaggacttcgagggtgccgacggattggtcgaaccgatgccc
gtcaaacccggccagcactacgcgatgggtgggatcgagaccgacgaaaacggcgcgacc
tgtgtcgacggactctacgccgccggcgaatgtgcgtgtgtgtccgtccacggtgcgaac
cgcctcggcggaaacgcgctccccgaactcatcgtcttcggcaagcgagcgggctatcac
gccgctggcggcgacctcggcgaggcagaaatcgaaaccggatacaccgattccgtcgag
gaagaagacgacaccgagttccccgttcagccgggttcggccggcctcgagccagcgggc
gacgacgtcgcggccgacggctccggacaggttacggacgccgacggcgtgctccagcgg
gccgtcgaaaccgagtccgagcgcatcgatcgattgatgaacaaagacaacggcgtccag
cacgccgaaatccggtcgaaacttcagaaggcgatgaccgactacgtcaacgtcttccgg
accgaggaagggatcaaacaggccctcgagatcatccgcgagtgtcgcgaggagtaccgc
gacgtctacgtcgccgacccctcgacgacctttaacaccgatctccagatgacctacgag
acccggaacctaatcgacgtggctgagacgatcgcactcggcgcgctcgtccgaaacgag
ttccgcggtgcccactggcgacaggaaaaccagatccgcgacgacgagaactggctgaaa
cacacgctggtctcctggaacgccggcaagccatcgatctggtaccgaccggtcatcctc
gagggcgaaagcaagaagtacgagcccaaagagcgcagctactga
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