Halostagnicola larsenii: HALLA_14205
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Entry
HALLA_14205 CDS
T03008
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALLA_14205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_14205
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HALLA_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_21
AAA_28
NTPase_P4
Apolipoprotein
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHF99764
UniProt:
W0JRF6
LinkDB
All DBs
Position
complement(1750643..1752427)
Genome browser
AA seq
594 aa
AA seq
DB search
MRLEEYWGVGPKTRETLVAELGRERAIRAIESGDVRTLSEAGLPRGRATRILRRATGGAG
MDVLATSDARKAYKELLDLAVEHAVTERAADRIRVLTPRTSRDEMIDRLDGVLAARDAWT
TLEDEDKERVLEAYDRYDERDESEHAAVEAALTLLEAGVDSGPFAAIAELERETLTEAAD
ALGALTGGRVREGADDELDRLRTALGAVEDMDANALELIEELRDDGIHDVEGFRDAFEDR
LLSETGVTVDQVRDAMPTDASDATDFVGGTLRALRSNLTEAVDERETAVAAEFEETLEAA
DDAVEQAVSAVDEIALHLSLARFAIAYDCTRPTFVGDESARSDRDAISVVNARNLSLEAR
EDESVQPVTYGLGAHGVTSVPEDVGSVPGEEDVAVLTGANSGGKTTLLETLCQVVLLASM
GLPVPADRAEVTPVDSLVFHRRHASFNAGVLESTLKSIVPPLSSGGRTLMLVDEFEAITE
PGSAADLLHGLVTLSVDRDAMGVFVTHLADDLEPLPEAARVDGIFAEGLDPDLELLVDYQ
PRFNTVGRSTPEFIVSRLVANATDRTERTGFETLAEAVGDEIVQRTLADARWNE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgaggagtactggggagtcgggccgaagacccgcgagacgttggtcgcggaa
ctcggtagggaacgagcgatcagagcgatcgagagcggcgacgttcggacgctctcggag
gcggggttaccccgaggtcgggcgacccgcattctccgacgggcgaccggcggcgcggga
atggacgtgttggcgaccagcgacgcccgcaaggcctacaaggaactgctcgatctggcg
gtcgaacacgcggtcaccgagcgggcagccgatcggatcagagtgctcacgccccggacg
agccgggatgagatgatcgaccggcttgacggcgtgctggctgctcgggacgcctggacg
accctcgaggacgaagacaaagaacgcgtgctcgaggcctacgaccgctacgacgagcga
gacgagagcgaacacgcggccgtcgaagcggcgcttacgttactcgaggcgggggtcgat
tccgggccgttcgcggcgatcgccgaactcgagcgcgaaacgttaacggaggccgccgac
gcgctcggcgcgttgacgggcggtcgagttcgcgagggggccgacgacgaactcgatcga
cttcggaccgcactcggcgcggtcgaggacatggacgcgaacgcgctcgaactcatcgag
gagcttcgggacgacggcatccacgacgtcgaggggttccgcgacgcgttcgaggaccgc
ctgctgagcgagacgggcgtcacggtcgatcaggttcgagacgcgatgccaaccgacgcc
agcgacgccaccgacttcgtcggcggcacgctccgggcgcttcgatcgaacctcaccgag
gccgtcgacgagcgcgagacggccgtcgcggcggaattcgaggaaacgctcgaggctgcg
gacgatgccgtcgaacaggcggtttctgcagtcgacgagattgccttacacctctcgctc
gcgcggttcgcgatcgcctacgattgtacgcgaccgacgttcgtcggggacgagagcgct
cggagcgaccgcgacgcgatttcggtcgtcaacgcccgcaatttgtcgctcgaggcgcgg
gaagacgaatccgtccagccggtcacgtacggtctcggcgctcacggcgtgacgagcgtc
cccgaagacgtcggctccgtccccggtgaggaagacgtggccgtcctcacgggggcaaac
agcggcgggaagacgacgctgctcgagacgctctgtcaggtcgtgttgctggcgtcgatg
ggattacccgttccggccgatcgggccgaagtgacccccgtcgattcgctggtctttcac
cgacgccacgcgagtttcaacgccggcgtgctcgagtcgacgctgaagtcgatcgtgccg
ccgttgtcctccggcggtcgaacgctgatgctcgtcgacgagttcgaagccatcaccgag
cccggaagcgcggccgatctgttgcacgggctcgtgacgctctcggtcgacagggacgcg
atgggcgtgttcgtcacacacctcgcggacgacctcgagccgctgcccgaggcggcgcgc
gtcgacggcatcttcgccgaggggctcgatcccgacctcgagttgctcgtcgattaccag
ccccggtttaacaccgtggggcgctcgacgccggagttcatcgtctcgaggctggtcgcg
aacgcgacggaccgaaccgaacggacgggctttgagacgctcgcggaagccgtcggcgac
gaaatcgtccagcggacgctcgcggacgcgcgctggaacgagtga
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