Halostagnicola larsenii: HALLA_14775
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Entry
HALLA_14775 CDS
T03008
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HALLA_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlr03021
]
HALLA_14775
Transcription machinery [BR:
hlr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HALLA_14775
Prokaryotic type
Archaeal type
TFB
HALLA_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Trm112p
Zn_ribbon_PaaD
Zn_ribbon_tTFIIB
Zn_ribbon_IS1595
Zn_ribbon_LysW
FtrD-like
Zn_Ribbon_YjdM
Cyclin_C
Cyclin_N
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AHF99863
UniProt:
W0JMQ5
LinkDB
All DBs
Position
complement(1855882..1856844)
Genome browser
AA seq
320 aa
AA seq
DB search
MTRSTRQRERTRETDETEEQEGVRACPECESDNLVKDSDRGELICQDCGLVVEEEKIDPG
PEWRAFNHQERQQKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVA
TSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPRFCS
ELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIHG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccacccgccagcgggagcgaacacgtgagacggacgagaccgaggaacaa
gaaggggtacgtgcctgccccgagtgtgaatcggataatctcgtaaaggattccgaccgg
ggtgagctcatctgtcaagattgtgggctcgtcgtggaggaggaaaaaatcgatcccggt
cctgagtggcgggcgttcaaccaccaggaacggcaacaaaagtcccgcgtcggcgcaccg
acgacccagacgatgcacgacaagggactgacgacgacgatcgactggaaagataaggac
gcctacggtcgttcgatttcttcgaaaaagcgcagtcagatgcaccgactgcgcaagtgg
caagaacgcatccgtaccaaagacgccggcgaacgtaatctccagttcgcgctcagcgaa
atcgatcggatggcctcggcgctcggcgtgccgcggtccgtgcgagaggtcgcatcggtc
atctatcgccgcgcgctcaaagaagacctgattcgcggtcgctcgatcgagggcgtcgcg
acgtctgcgctgtatgccgcctgcagaaaggagggcatcccgcgcagtctcgaggaaatt
tcggaagtctcacgcgtcgaacgcaaagaaatcgggcgaacgtatcgatacatctcgcag
gaactcggcctcgagatgcgacccgtcgacccgaaaaaatacgtcccacgattctgttcc
gaactcgaactctccgaagaggtccagaccaaagccaacgagatcatcgagaagacggcc
gaagaaggactcctctcgggcaaatcaccgaccggatacgccgcagccgcgatctacgct
gcctcactgctctgtaacgagaaaaagacccagcgcgaagtcgcagacgtcgcgcaggtc
accgaagtgaccatccggaaccgctatcaagaacagatcgaagcgatggggatccacggt
taa
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