Halostagnicola larsenii: HALLA_14885
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Entry
HALLA_14885 CDS
T03008
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALLA_14885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_14885
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HALLA_14885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PLU-1
AAA_14
AAA_27
nSTAND_NTPase5
Spectrin_Anc-1
Motif
Other DBs
NCBI-ProteinID:
AHF99884
UniProt:
W0JRT5
LinkDB
All DBs
Position
complement(1876658..1879345)
Genome browser
AA seq
895 aa
AA seq
DB search
MDSACGPPPEMAERREELTPMMGQYHDLCARYDDAIVLFQVGDFYETFCGAAERTARLLE
LTLTSREDSTGEYPMTGIPVDNAASYIDDLLEAGYRVAVADQVEEPGESPGVVERAVTRV
ITPGTLTEDELLASDDNNFVAALARDGDARGLALLDVSTGDFLATSSTSSEAIADEMSRF
DPAEAIVGPAADGTLAPEDCMVTPFDESAFERERAGEMLADYFGDPDSLLAGDAEVRACG
ALLAYAEYARGGVEENDDADSAGMIETGTQTTRLEYLTHLTRYDPREYLLLDAVALRSLE
LFEPRAVYGREEATLFGVLDETSSALGGRKLRDWLRRPLLEPARIEARLDAVEELTDAVA
TREELQDLLRDVYDLERLIGRISRERANARDLRSLRDTLAVVPEIRDRLEAVRGECDRLE
SLYANLDPLADVRELIEDGIVSDPPIEITEGGVIAEGYDDDLDRLRETARDGKQWIDDLE
ETERERTDIDSLSVGYNSVHGYYIEVTNPNLESVPENYQRRQTLKNSERFVTPDLKKRED
EIVGAEERADEREYELFCEIRREIADEVERVQGLAEAVATLDALVSLSTVGAQYDYCRPE
LLERGDEQVLEIDGGRHPVVERTQESFVPNGARFSSDRRLGIITGPNMSGKSTYMRQVAQ
IALLAQVGSFVPAQSVRLTPLERIFTRVGASDDIAGGRSTFMVEMDELATILAEADDRSL
VLLDEVGRGTSTADGLAIAQAITEHLHDEVGATTLFATHHHPLTELTAELEAAFTLHFET
TQEDGEVVFHHEIAPGAADGSYGVSVATAAGVPEPVVERSRKLVAEAADEPADERTAPDG
PSQRATRDETATTASADGGDVPTDVAAELRALDLAHLTPVEALTELDRLKRLLEE
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggactcggcctgtggcccgccacccgaaatggccgaacggcgcgaggaactgacgccc
atgatgggccagtaccacgacctctgtgcgcgctacgatgacgcgatcgttctctttcag
gtcggcgacttctacgaaaccttctgcggcgcggcagaacgaaccgcccgcctcctcgag
ttgacgctcaccagccgggaggattcgaccggggagtatccgatgaccgggatcccggtc
gacaacgccgcctcctacatcgacgacttgctcgaggcgggctaccgcgtcgcggtcgcc
gatcaggtcgaagagccgggcgagtcgcccggcgtggttgaacgcgctgtcacgcgcgtc
attacgcccgggacgctcaccgaagacgaactgctcgcgagcgacgacaacaacttcgtc
gcggcgctggctcgcgacggcgacgcccgcgggctcgcactcctcgacgtgtcgaccggc
gacttcctcgcgacgagttcgacctcgagcgaggcgatcgccgacgagatgagccggttc
gatcccgccgaggcgatcgtcggcccggcggccgacgggacgctcgctcccgaggactgc
atggtcacgcccttcgacgaatccgcattcgagcgcgagcgcgccggcgagatgctcgcc
gactatttcggtgaccccgattcgttgctcgcaggagacgcggaggtgcgggcctgcggc
gccttgctcgcctacgcggagtacgctcgagggggcgtcgaagagaacgacgacgccgac
tccgccgggatgatcgaaaccggcactcagacgacgcgactcgagtacctgacccatctc
acgcgctacgacccgcgggagtacctcctgctcgacgccgtcgcgttacgcagcctcgaa
ctgttcgaacctcgggccgtctacggcagggaggaggccacgctgttcggcgtcctcgac
gagacctcgagcgcgctgggcgggcggaaactcagagactggcttcgtcgaccgctgctc
gaaccggcccggatcgaagcgcgcctcgacgcggtcgaggagttgaccgatgccgtcgca
accagagaggagctacaggacctgcttcgggacgtgtacgatctcgagcgactgatcggc
cggatctctcgggagcgggcgaacgcgcgggacctgcgctcgctgcgggacacgctcgcg
gtcgtccccgagatcagggaccgactcgaggccgtccggggcgagtgcgaccgactcgag
tcgctgtacgcgaacctcgacccgctcgcggacgttcgcgaactgatcgaggacggaatc
gtttccgacccgccgatcgagatcaccgagggcggcgtcatcgccgaggggtacgacgac
gacctcgaccggctccgcgagaccgcacgggacggcaagcagtggatcgacgacctcgag
gaaaccgaacgcgagcgaaccgacatcgactcgctgtcggtcggctacaactccgtccac
ggctactacatcgaggtcaccaacccgaacctcgagtcggtgccggagaactaccagcgc
cggcagacgttgaagaactccgagcggttcgtcacgccggatctcaagaagcgagaggac
gaaatcgtcggtgccgaagagcgcgccgacgagcgcgagtacgagctgttctgtgagatt
cgacgcgagatcgccgacgaggtagaacgcgtccaggggctcgcagaggccgtcgcgacc
ctcgacgcgctcgtctcgctttcgaccgtcggggcacagtacgactactgtcggcccgag
cttctcgagcgcggggacgaacaggtgctcgagatcgacggcggcagacaccccgtcgtc
gagcgaacccaagagtcgttcgtcccgaacggggctcgcttttcgagcgaccgccgactg
gggatcatcaccggaccgaacatgtccgggaagtcgacgtacatgcgacaggtcgcccag
atcgcgttgctcgcgcaggtcggcagcttcgttcccgcccagtcggttcgattgacgccg
ctcgagcggatcttcacccgggtcggcgcgagcgacgacatcgcgggcgggcgctcgacg
ttcatggtcgagatggacgaactcgcgacgatactcgcggaggccgacgatcgctcgctc
gtgctgctcgacgaagtcggccgcgggacctcgacggcggacgggctcgccatcgcgcag
gcgatcaccgaacacctccacgacgaggtcggcgcgacgacgctgtttgcgactcaccac
cacccgctgaccgaactgactgcggagctcgaggccgcgtttacccttcacttcgagacg
actcaggaagacggcgaggtcgtcttccaccacgaaatcgcccccggcgcggccgacggc
tcctacggcgtctccgtcgcgaccgcggcgggcgtccccgaacccgtcgtcgagcgctcg
cgaaagctggtcgcggaggcggccgacgagccggcggacgaacgaacggcgcccgacggg
ccgagccaacgagcaacgcgtgacgagacggcgacgaccgcgagcgcagacggcggggac
gtgccgaccgacgtcgcggccgaactccgcgcgctcgatctggcccacctcacgccggtc
gaggcgctgaccgaactggatcggttgaagcggttgctcgaggagtaa
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