KEGG   Halostagnicola larsenii: HALLA_15235
Entry
HALLA_15235       CDS       T03008                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hlr  Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:hlr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlr03400]
    HALLA_15235
Enzymes [BR:hlr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HALLA_15235
    5.6.2.6  RNA 3'-5' helicase
     HALLA_15235
DNA repair and recombination proteins [BR:hlr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HALLA_15235
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII Cas3-like_C_2 AAA_22 Astro_VPg T2SSE
Other DBs
NCBI-ProteinID: AHF99944
UniProt: W0JRZ0
LinkDB
Position
complement(1937805..1940651)
AA seq 948 aa
MDGSALPVDDEHLPFDPSSAEIDDREVFDLLEPALQEWWLEAFGEYVPENDGFFTPPQAG
AIPKIHKGTNTLICAPTGSGKTLASFTAIINELFERDREIEDGLENSVYCLYISPLKSLA
NDIHRNLEVPLEGIEGIVEDRGGSMGEIRHAIRHGDTDSSARQKMLEETPHILNTTPETL
AILLNSPKFREKLRTVEYVIVDEIHSLAGSKRGTHLSVSVERLEAMSETEITRIGCSATI
EPLSRVAEFLVGYDEADGSAPAKADSESASDGESGPTSDPEPASDGERTPRPYDIVDARF
AREFDLRLECPTDDLINTSRDVVQDRFYEQLHEHIQEHTNTLVFTNTRSGAERVLHNLRE
RFDEYGEDNSGCHHGSLSKGVRQEVEGKLKDGELDVVTSSTSLELGIDMPHVDLVVQVGS
PKSVAALLQRVGRAGHRVGQTVTGRVIALDRDELLECAVMLKKAKDGFVDSVSIPENAQD
VAAQHVYGMAIAEIRPEREIRTILERAYPYRNYSEGEYESLMSYLTADYAGMEDRNVYAK
IWRDENDPPDGEHHYEEFPVGEPLIGKRGRLARVIYMTNIGTIPDSFTCNVHTRASDEWV
GQLDENYLDTLEKGDVFVLGGDHFEYQYRRGSKVYADRTSARPTVPSWYSERLPLSYDLG
CEILAFQRELLAHHAEGGSPRVRAWLREFPLGDDCVRAIARLFDHQLRYAGPESVSTENR
LTIEVERDREEYERHYYVHSNYGRKVNDGLSRLFAYRCAQEATANVRVAVADNGFVLSMP
LNRKIDLEGIVSDLEAEQVRDDLRSAISGTDLLQRYFRINATRALMILKRYKGYEKSASE
QQVSSEMLLGFAEGLEEFAVIEETYREILEDKLNVDEIEDIVSRIDGGELVVERQLLDSP
TPRAFGLATLSASDVVLAEDESAALQNFHEHVLEEIGEESVRGLPTDD
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggatgggagcgcgctgcccgtcgacgacgagcacctgccgttcgatccctcgagcgcc
gagatcgacgaccgggaggtgttcgacctgctcgagccggccctccaggagtggtggctc
gaggcgttcggcgagtacgttcccgagaacgacgggttcttcacgccgccgcaggcgggc
gcgatcccgaagatccacaaggggacgaacacgctgatctgtgcgcccaccggatcgggc
aagacgctcgcctcctttaccgcgatcatcaacgaactcttcgagcgtgatcgggaaatc
gaggacgggctagagaactccgtctactgcctgtacatctcgccgctgaagtccctcgca
aacgacatccaccggaacctcgaggtcccgctcgaggggatcgaggggatcgtcgaggac
cgcggcggttcgatgggcgagatccgccacgcgatccgccacggcgacacggactcgagc
gcgcgacagaagatgctcgaggagacgccccacattctgaatacgacgcccgagacgctc
gctatcttgctcaactccccgaagttccgcgagaagcttcggaccgtcgagtacgtcatc
gtcgacgagatccactcgctcgcggggagcaagcgcggcacgcatctctcggtgagcgta
gagcgcctcgaggcgatgagcgagacggagatcacccgaatcggctgctcggcgacaatc
gagccgctgtctcgcgtcgcggagtttctggtcggctacgacgaggcggacggttctgct
ccggcgaaggccgatagcgaatcggcatccgatggcgagtctggaccgactagcgatccg
gaaccagcatccgacggcgagcgaacgccgagaccatacgatatcgtcgacgcgcgattc
gcccgcgagttcgacctccgcctcgagtgtccgaccgacgacctgatcaacacgtctcga
gacgtcgtgcaggaccggttttacgagcagcttcacgaacacattcaggagcacacgaac
acgctggtgtttacgaacacgcgatccggcgcggagcgcgtgctccacaacctgcgcgag
cgcttcgacgagtacggcgaggacaactccggctgtcaccacggcagtctctcgaagggg
gtccgccaggaggtcgaagggaagctcaaggacggcgaactggacgtcgtcacctcctcg
accagcctcgagctagggatcgacatgccccacgtcgacctcgtggttcaggtcgggtcg
cccaaatccgtcgccgcgctcctccagcgggtcggccgggcgggccaccgcgtcggccag
acggtgaccggacgcgtgatcgcgctggatcgggacgaactcctcgagtgtgcggtaatg
ttgaaaaaggccaaagacggcttcgtcgactccgtttcgatcccagagaacgcccaggac
gtcgccgcccagcacgtctacgggatggcgatcgccgagattcgtcccgagcgcgagatt
cggacgattctcgagcgagcctacccgtaccggaactactccgagggcgagtacgagtcc
ctgatgagctacctgacggccgactacgccgggatggaggaccgaaacgtctacgcgaag
atctggcgggacgagaacgacccgcccgacggcgagcaccactacgaggagttccccgtc
ggcgaaccgctgatcggcaagcgagggcggctcgctcgagtcatctacatgaccaacatc
gggacgattcccgattcctttacctgcaacgtccacaccagagcgagcgacgagtgggtc
ggccaactcgacgagaactacctcgacacgttggagaaaggcgacgtgttcgtcctcggc
ggcgatcacttcgagtaccagtaccgacgcggctcgaaggtctacgcggatcggacgagc
gcccgcccgaccgtcccctcgtggtattccgaacgcctgcccctgtcgtacgatctggga
tgtgaaatcctcgcgttccagcgggagctgctcgcccaccacgccgagggcggttcgccg
cgggtccgtgcgtggctccgggagtttcccctgggcgacgactgcgttcgcgccatcgcg
cggctattcgaccaccaacttcggtacgccggccccgagagcgtgagcaccgagaaccga
ctcaccatcgaggtcgaacgcgaccgcgaggagtacgagcgacactactacgtccactcg
aactacggtcgaaaggtcaacgacggcctctcccggctgttcgcctaccgctgtgcacag
gaggcgaccgcgaacgtccgcgtcgccgtcgccgacaacgggttcgtcctctcgatgccg
ctcaaccggaagatcgacctcgagggaatcgtctcggatctcgaggccgagcaggtccgg
gatgacctccgaagcgccatctccgggaccgacctgctccagcgatatttccggatcaac
gcgacgcgagcgctgatgatcctcaaacgctacaagggctacgaaaaatcggccagcgaa
cagcaggtctcgagcgagatgctgcttggcttcgcggaaggtctcgaggagttcgccgtg
atcgaggagacctaccgcgagatcctcgaggacaaactgaacgtcgacgaaatcgaggac
atcgtttcgcggatcgacggcggtgaactggtcgtcgaacgtcagttgctggactcaccc
acccctcgagcgttcggcctcgcgaccctctctgcgagcgatgtcgtcctcgccgaagac
gagagcgccgcgttgcagaactttcacgagcacgtcctcgaggaaatcggcgaggagtcg
gttcggggcctcccgacggacgactga

DBGET integrated database retrieval system