Halostagnicola larsenii: HALLA_15640
Help
Entry
HALLA_15640 CDS
T03008
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlr03032
]
HALLA_15640 (gyrB)
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_15640 (gyrB)
Enzymes [BR:
hlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HALLA_15640 (gyrB)
DNA replication proteins [BR:
hlr03032
]
Prokaryotic type
DNA Topoisomerases
HALLA_15640 (gyrB)
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HALLA_15640 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHG00016
UniProt:
W0JMS5
LinkDB
All DBs
Position
2006415..2008346
Genome browser
AA seq
643 aa
AA seq
DB search
MSQESEYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDI
TVSIHDDGSVTVTDDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKSYQVSGGLHGVG
VSVVNALSSRFEVEVKRDGGVFRHAFERGEPQGDMERVRDLEADEDTGTEITFWPDDEIF
ETDQFAFSTLSNRLRELAFLNSGVRITLRDERERNDDGEFVAETYEYEGGIREFVEYLNE
TRSSMHEEIIYFEDEDENIQVEVAMQATQELQGSIHAFANNINTREGGTHLTGFKTALTR
TVNDYAKENDLLSDLEENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVES
AMHEGLGIYFEENPDTAQAVVMKAVEAAKARMAAQKAEELTRRKSALDSTSLPGKLADCQ
TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNLI
TAIGAGIGDEFDVEDIRYKKIIMATDADVDGAHIRTLLLTFIYRHMRPLLEGGYVYATQP
PLYRIRYRGETYDAMTDAERDEIVAEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPDNRI
LKQITVEDAAAADKMFSVLMGDAVEPRKQFIKDNAPEAEWIDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggaaagcgagtacggcgccggccagattcaggtcctagaaggcctggaggcc
gtccgaaagcgcccggcgatgtacatcggttctaccgattctcggggacttcaccatctc
gtctacgaagtggtggacaactcgatcgacgaggcactggcaggccactgtgacgatatc
accgtctcgatccacgacgacggttccgttaccgttaccgacgatggccgtgggattccc
gtcgacacccacgaagagtacgaccgtccggcgctcgaggtgatcctcaccgtcctccac
gccggcggtaagttcgacaacaagtcctaccaggtgtcgggcggactccacggcgtcggc
gtctccgtggtgaacgccctctcgagtcggttcgaggtcgaagtcaagcgcgacggcggc
gtctttcgccacgcgttcgaacgcggcgaaccccagggggatatggaacgcgttcgcgac
ctcgaagccgacgaggatacgggtaccgagatcacgttctggcccgacgacgagatcttc
gaaaccgaccagttcgcgttctcgacgctctcgaaccggcttcgtgaactcgccttcctc
aactccggcgttcgcatcactctccgcgacgaacgcgagcgaaacgacgacggcgagttc
gtggccgagacctacgagtacgaaggcggcatccgcgagttcgtcgagtacttgaacgag
acccgctcgtcgatgcacgaggagatcatctacttcgaggacgaagacgagaacatccag
gtcgaggtcgcgatgcaagcgacccaggagctccagggatcgatccacgcgttcgcgaac
aacatcaacacgcgcgaaggcgggacccacctcaccggattcaagaccgccctgacccgg
acggtaaacgactacgccaaggagaacgacctcctctcggatctcgaggaaaacctcaaa
ggcgaggatatccgcgaggggctaaccgcggttatctcggtcaaacatcccgatccgcag
ttcgagggccagaccaagacgaaactcggcaacagcgaagtccggggcatcgtcgagagc
gccatgcacgaggggcttgggatctacttcgaagagaaccccgacaccgcccaggcggtc
gttatgaaagcggtcgaggcggcaaaggctcgaatggcggcccagaaggccgaagaactc
acccggcgaaagtcagcgctcgattcgacctcgctaccggggaaactcgcggactgtcag
accaaagaccccgaggaggcagaactgttcatcgcggagggtgactccgcgggcggcagc
gcaaaacaggctcgaaatcccgagtttcaggccgttcttccgatcaaagggaagatcctg
aacgtcgagaaacaccgactcgaccggatcctcgagaacgacgagatccgaaacctgatc
accgcgatcggggccggaatcggcgacgagttcgacgtcgaggatattcgatacaagaag
atcatcatggcgacggacgcagacgtcgacggggcccacattcgaacgctcctgttgacg
tttatctaccgccacatgcgtccgttgctcgagggcgggtacgtctacgccacccagccc
ccgctgtaccggattcggtatcgcggcgagacctacgacgcgatgaccgacgccgaacgc
gacgaaatcgttgccgaaaagtgcgacggcaacccgacgcaggtccagcgattcaagggc
ctcggcgagatgaaccccgaacagctctgggagacgacgatgaatcccgacaaccgcatc
ctcaagcagatcaccgtcgaggacgccgcggcggcggacaagatgttctcggtgctgatg
ggcgacgcagtcgagccgcgaaagcagttcatcaaggacaacgcgccggaagccgagtgg
atcgacatatag
DBGET
integrated database retrieval system
