Halostagnicola larsenii: HALLA_17270
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Entry
HALLA_17270 CDS
T03008
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlr03016
]
HALLA_17270
Enzymes [BR:
hlr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HALLA_17270
Transfer RNA biogenesis [BR:
hlr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HALLA_17270
Prokaryotic type
HALLA_17270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHG00290
UniProt:
W0JSW8
LinkDB
All DBs
Position
complement(2317536..2318399)
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AA seq
287 aa
AA seq
DB search
MRAFRIAYDGTDYFGFQRQPDVTTVEDTIFDALRRLEVLAADADKPEGYAAAGRTDAGVS
ALAQTIAFDAPEWLTPRAINSELPADVRAWASADAPPSFHAIHHASRRTYTYHLYAPATT
AVDADDWRSASTPFGNAARVDDERFHAALEALSGAHDFHNLTPDDRNTERSPTLEATRDG
AFLVVTVSAGGFSRELVRRLVSLAREVGSEETSLARIDRALESEPLAGHEGIAPAPPEPL
VLTAVDYPDLEFSVDETAATSARELFDRRRVEQRTAARISRQLRDGL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctttcggatcgcctacgacggcaccgactacttcggcttccagcgccagccc
gacgtgaccaccgtcgaggatactatcttcgatgccctgcgcaggctcgaggtgctggcc
gccgacgccgacaaacccgagggctacgccgccgccggtcggacagatgccggcgtatct
gcactcgcacaaacgatcgcgttcgacgcgcccgaatggctcacgccgcgagcgatcaac
agcgaactgccagccgacgttcgggcgtgggcgagcgccgacgcaccgccgtcgttccac
gcgatccaccacgcgagcagacgaacgtacacctaccatctctatgcgcccgccacgact
gccgtcgacgcggacgattggcggtctgcgtcgactccgtttgggaacgccgctcgcgtc
gacgacgaacgattccacgccgcactcgaagcgctctctggcgctcacgattttcacaac
ctgacgccggacgaccgaaacaccgagcgctcaccgacgctcgaggcgacccgcgacggt
gcgtttctcgtcgtcaccgtgtccgcgggcggcttctcgcgcgaactggtccgcaggctc
gtctcgctcgcccgcgaagtcggttcggaggagacgtcgctcgcacggatcgatcgagcg
ctcgagtccgaaccgctggcgggccacgagggtatcgcccccgcgccgccggaaccactg
gtgctcacggcggtcgactatcccgacctcgagttcagcgtcgacgagacggcggcgacg
agcgcgcgagagctcttcgaccgtcggcgcgtcgaacagcgaacggccgcgcggatctcg
agacagctccgcgatgggctgtag
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