Halostagnicola larsenii: HALLA_17745
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Entry
HALLA_17745 CDS
T03008
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALLA_17745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_17745
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HALLA_17745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
DUF2520
Motif
Other DBs
NCBI-ProteinID:
AHG00365
UniProt:
W0JT23
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All DBs
Position
2410377..2413115
Genome browser
AA seq
912 aa
AA seq
DB search
MTEATGIVGEFLSLKETTDAEVLAMQCGDFYEFFDEDAELVAEELDLKLSQKSSHGSSYP
MAGVPLDDLTPYLKALVERGYRVAVADQYETDEGHAREIVRVVTPGTLLETTDADAQYLA
AVVEDGAAGGSAGASPTADVGDDASYGLAFADVTTGRFLVASGEDSAETLTELYRFDPVE
VLPGPAVRNDDELVQRIRDRTDATLTLHEAESFAPKRAEHVVREQFGREPLEGLDVPRPA
ISAAGSILSYVEETGAGVLASMTRITTHRSDDHVTLDGTTQRNLELTETMQGDREGSLFA
TIDHTETSAGGRLLKEWLQRPRRSQSVLEERQQSVAALASAALARDELREVLGAAYDLER
LASKATHGSADAQDLVAVRETLEVLPQIADVIDSDAELGESPLSAIVDRPDRTAVADLWE
MLEEAIAEEPPSTVTQGGLLQRGYREELDEVIDRHEAVRRWLENLADREKREYGLSHVTV
DRNKTDGYYIQVGRSVADEVPDHYEQIKTLKNSKRFTTPELEDKEREILRLEERRGDLEY
ELFESLREDVAAEAALLQDVGRALATVDALSSLATHAAANGWVRPELRRDGDLEIDQGRH
PVVEQTTEFVPNDVRMTDDRGFLVVTGPNMSGKSTYMRQVACIVLLAQVGSFVPAREAEI
GLVDGIFTRVGALDELAQGRSTFMVEMSELSNILHTATEESLVILDEVGRGTATYDGISI
AWSATEYLHNEVRAKTLFATHYHELTGLAEHLPRVANVHIAADERDGDVTFLRTVRDGPT
DRSYGIHVADLAGVPGPVVDRARDVLGRLREEKAIEAKGDGSSEPVQAVFDLSSGTMERS
ATTDGGEAASKSATQASLETAASSETDADREAALEPEKADVLADLEDVDVNETSPIELLT
KVQEWQRRLEDE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggcgacgggtatcgtcggcgagtttctctcgctcaaggagaccaccgacgcc
gaggtgctggcgatgcagtgtggcgacttctacgagttcttcgacgaggacgccgaactc
gtggccgaggaactcgacctcaagctctcacagaagtcctcccacgggtcgtcgtatccg
atggcgggcgttccgctcgacgacctcacgccctacctcaaggccctcgttgagcgcggc
taccgcgtcgccgtcgccgaccagtacgaaaccgacgaggggcacgcgcgcgaaatcgtt
cgcgtcgtgacccccggcacgctcctcgagacgaccgacgccgacgcgcagtatctcgcg
gccgtcgtcgaggacggcgctgcaggcgggtcggcaggcgcgtcaccgactgccgacgtc
ggtgacgacgcgtcctacggcctggcgttcgccgacgtgacgaccggacgattcctcgtc
gcgagcggcgaggacagcgcggagacgttgacggaactgtatcgattcgatcccgtcgag
gtgttgccgggtcctgcggttcgcaacgacgacgaactcgttcagcggattcgcgatcgg
accgacgcgacgttgaccctccacgaggccgaatcgttcgcgcccaaacgcgccgagcac
gtcgttcgcgagcagttcggacgcgaaccgctcgagggcctcgacgttccccgacccgcg
atttcggcggcggggtcgatcctctcgtacgtcgaggagaccggagccggcgtgctcgcg
tcgatgacccggatcacgacccaccgcagcgacgatcacgtgaccctcgacggcacgacc
cagcgcaacctcgagctaaccgagacgatgcagggcgaccgcgaggggtcgctgttcgcg
accatcgaccacaccgagacgagcgcgggcgggcggcttctcaaagagtggctgcagcga
cctcgaagatcgcagtcggtcctcgaggagcgccagcaaagcgtcgccgccctcgcttcg
gccgcgctggctcgcgacgaactccgcgaggtgctcggggcggcctacgatctcgagcga
ctggcctcgaaagcgacccacggaagcgccgatgcgcaggacctggtcgcggttcgagag
acgctcgaggtgctgccgcagatcgccgacgtaatcgattcggacgcggagttaggcgag
tcgccgctctcggcgatcgtggatcggccggaccgaacggcggtcgccgacctctgggag
atgctggaggaagcgatcgccgaggaaccgccctcgacggtgacccagggcggcttgctc
cagcggggctaccgcgaggaactcgacgaggtgatcgaccgccacgaggcggtccgacga
tggctcgagaacctcgccgaccgagagaagcgcgaatacggactgagccacgtcaccgtc
gaccggaacaagaccgacggctactacattcaggtgggccggtcggtcgccgacgaggtg
ccggaccactacgagcagatcaagacgctgaaaaactcgaagcggtttacgacgcccgaa
ctcgaggacaaagaacgggaaatcttgcgactcgaagagcgacggggcgacctcgagtac
gaactcttcgagtcgcttcgcgaggacgtcgccgcggaggcggcgctgttgcaggacgtc
gggcgagcgctcgcgacggtcgacgcgctctcgagtctggcgacccacgcggcggccaac
ggctgggtgcggcccgaactgcgtcgagacggcgacctcgagatcgatcagggccgccat
cccgtcgtcgagcagacgaccgagttcgtgcccaacgacgtgcggatgaccgacgaccgg
ggctttctggtcgtcaccggtccgaacatgtccgggaaatcgacgtacatgcgccaggtc
gcctgcatcgttctgctcgcgcaggtcggcagcttcgtgcccgctcgagaggccgaaatc
gggctcgtcgacggcatcttcacccgggtcggggcgctcgacgagttggcccaggggcgc
tcgacgttcatggtcgagatgagcgaactctcgaacatcctccacaccgcgaccgaggag
tcgctggtgattttggacgaggtgggccggggtaccgcgacctacgacggcatctcgatc
gcgtggtcggcgaccgagtatctccacaacgaagttcgagccaagaccctctttgcgacc
cactatcacgaactgacgggactcgcagaacacctgccgcgggtcgcgaacgtccacatc
gctgccgacgaacgcgacggcgacgtaacctttctccggacggttcgagacggcccgacg
gatcgctcctacgggattcacgtcgccgacctcgccggggttcccggccccgtcgtcgac
cgagcgcgggatgtgctcggacgcctgcgcgaggagaaggccatcgaggcgaaaggcgac
ggctcctcggagccggttcaggccgtcttcgacctctcgagtggcacgatggaacggtcg
gcgacgaccgacggcggcgaggccgcgtcgaaatcggccacccaggccagtctcgagacg
gcggcgagtagcgagacggacgccgaccgcgaagccgcactcgagcccgagaaagcggac
gtgctcgcggatctcgaggatgtcgacgtgaacgaaacgtcgccgatcgaactgctcacg
aaggtacaggagtggcaacggaggctcgaagatgagtga
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