Halostagnicola larsenii: HALLA_18615
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Entry
HALLA_18615 CDS
T03008
Name
(GenBank) DNA mismatch repair protein mutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALLA_18615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_18615
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HALLA_18615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_5
MutS_V
HHH
AAA_21
RecR_HhH
AAA
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AHG00506
UniProt:
W0JP59
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Position
2568521..2570545
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AA seq
674 aa
AA seq
DB search
MELETIPGVGEKTARSLATLEDPERALKSGDVAALAKAPGITQGRAARIARGAIRREHDD
PGGFLATERAREIYREVLSLCKERTVTEYGAQRLETIYPSPCRSRIEEVQTFAREAIERD
PDPAVLEALEGVEPLADTGDVQVRGRCLATTDAERYTAARESIPELSVEVVEDAQGLAEL
ARGYSTVIAIDEAFAGVTVDGDVQVRPDALENPAEIVPERSIAFFAHNRDSLQAAIAVHR
SADLETDCDLAALEAGLARVNDDGTVAGDDELDRLATAVDDLEAAVGAAESVANDHLRQA
IREQDVTIEGSDLLSLVEQGAGVDSLLSRELADEYARAVEAAREHLIDALDLDAGEAELA
RRTFGDEPTFPVERDEDTVTRLREELTATRERRETRLKRDLAADLADQRATAENLVRNAL
ELDVELAIARFARDFECTMPEFVGGSAGSADLANANGSAGGRGFEIDGGRSPLLSEPLEA
IEPVDYGVSGVALLSGVNSGGKTSTLDLVAGVVVLAHMGLPVPADRVRLERFESLHYHAK
TQGTLDAGAFESTVRQFADLADGGAGSLVLVDELESITEPGASAKIIAGILEALSENGAT
AVFVSHLAGEIREMAIYDVSVDGIEAVGLVDGELEVNRSPIKDHLARSTPELIVEKLADE
SDAVFYDRLLEKFS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgagacgattccgggcgtcggcgagaagacggctcggtcgcttgcaacgctc
gaggatcccgagcgggcgctgaaatcgggcgacgtggcggcgctcgcgaaggcaccggga
attacgcagggacgagccgcccggatcgcgcgcggggcgatccgtcgcgaacacgacgac
cccggtggcttcctcgcgaccgagcgcgcacgcgagatctaccgcgaggtgctctcgctg
tgtaaagaacgcaccgtgacggagtacggagcccagcgtctcgagacgatctacccgagc
ccgtgtcggtcgcggatcgaggaggtacagaccttcgcgcgcgaggcgatcgagcgcgac
cccgatccggcggtcctcgaggccctcgagggggtcgaaccgctcgcggataccggcgac
gtccaggttcgcggacgatgtctcgcgacgaccgacgccgagcggtatacggccgcccgc
gaatcgattccggaactctcggtcgaggtcgtcgaagacgcacaggggttagccgaactc
gcccggggctactcgacggtgatcgccatcgacgaggcgttcgccggcgtcaccgtcgac
ggcgacgtacaggtccggcccgacgccctcgagaaccctgcggagatcgttcccgaacgc
tcgatcgcctttttcgctcacaatcgcgacagcttgcaggctgccatcgccgtccaccgc
agcgcggatctcgagaccgattgcgacctcgcggcgctcgaagccggactcgcccgggtg
aacgacgacgggaccgtcgccggcgacgacgaactggaccgactcgcgacggcggtcgac
gacctcgaggcggcggtcggagcggccgaatccgtcgcgaacgatcaccttcgccaagcg
atccgcgaacaggacgtcacgatcgaagggtcggatctgctctcgctggtcgaacagggt
gcgggcgtcgactcgttgctctctcgagaactcgccgacgagtacgcacgggccgtcgaa
gccgcccgcgagcacctgatcgacgcgctcgatctcgacgccggcgaagccgaactcgca
cgccggacgttcggagacgaaccgacgtttccggtcgaacgcgacgaagataccgtcact
cgacttcgagaggagctcacggcgaccagagaacgccgcgagacgcgactgaagcgcgac
ctggcggctgacctggctgatcaacgtgcgacagcggagaacctcgttcggaacgccctc
gaactcgatgtcgaactcgccatcgctcgctttgcgcgcgatttcgagtgtacgatgccg
gagttcgtcggcgggtcagcaggatcggcggatttagcgaacgcgaacggatcggccggc
ggtcgcggattcgagatcgatggcggccgatcgccgttgctttcggaaccgctcgaggcg
atcgaaccggtcgactacggcgtctctggcgtcgcgctcctgtcgggtgtcaacagcggc
gggaagacgtcgacgctcgatctggtcgccggtgtcgtcgtgctggcgcacatggggctg
ccggtgccggctgatcgggttcgactcgagcgcttcgagtcgcttcactaccacgccaag
acccaggggacgctcgacgcgggcgcgttcgagtcgacggtcaggcagttcgccgatctg
gccgacggcggggcggggtcgctggtgctggtcgacgaactcgagagcatcaccgaaccc
ggcgcgtcggcgaagatcatcgcgggcatcctcgaggcgttatcggaaaacggggcgacg
gcggtgttcgtctcacacctcgcgggagaaatccgcgagatggcgatctacgacgtgtcc
gtcgacggcatcgaagccgtgggactcgtcgacggcgaactcgaggtcaaccgctcgcca
atcaaagaccacctcgcgcgctcgacgccggaactaatcgtcgagaagttagccgacgag
agcgacgccgtcttctacgaccgactgctcgagaagttctcgtga
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