Halostagnicola larsenii: HALLA_20830
Help
Entry
HALLA_20830 CDS
T03008
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HALLA_20830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlr03021
]
HALLA_20830
Transcription machinery [BR:
hlr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HALLA_20830
Prokaryotic type
Archaeal type
TFB
HALLA_20830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
A2L_zn_ribbon
Cyclin_N
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AHG02351
UniProt:
W0JUU9
LinkDB
All DBs
Position
unnamed4:39603..40562
Genome browser
AA seq
319 aa
AA seq
DB search
MSRSTIHRVKDETQERETELCPDCETATIVQDPDRGERVCRDCGLVLSEDPIDYGPEWRA
FNAQEHDQLSRVGAPLTQSMHDRGLTTTIDWRNRDAKGRSMSADKHGQIHRLRVWQERIR
TKNAGERNLKYALSEIDRMASALGVPKPVKETASVIYRQALERDLIRGRSIEGVATSALY
TACRKEDIPRSLEEVTAVARVDQREIGRTYRYIAAELDINLEPTNPRQFVPRFCSELDVG
TDVESKAIEIIEETTAQGLHSGKSPTGFAAAAIYAAGLLCDETIPQRAVAETAQTTVVTV
RNRYREQLEAIDEQPKAAT
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtctaccatccatcgcgtcaaagacgagacacaggagcgagaaacggaactg
tgtcccgactgcgagaccgctacgatcgtccaggatccggatcggggcgagcgagtctgt
cgagactgtggtctcgtgttgagtgaggacccgatcgattacggcccggaatggcgagcg
ttcaacgcgcaggagcacgaccaactctcgcgcgttggagccccgctcacgcagtcgatg
cacgaccggggcctgaccacgaccatcgactggcgaaatcgtgacgcaaagggccggtcg
atgtcagcggacaagcacggtcagatccaccgactccgcgtctggcaagagcgaatcaga
accaagaacgcgggcgaacgaaacctcaagtacgccctctcggaaatcgatcgcatggca
agcgcgctcggcgtcccaaagcctgtcaaagaaacggcctctgtcatctacagacaggcc
ctcgaacgggacctcatccgcggacgatcgatcgaaggcgtcgcgacgagcgcactctat
acggcctgtcgaaaagaagacatcccgcgaagtctcgaggaggttactgccgtcgcacgc
gtcgatcaacgcgaaatcgggcgcacctatcgctacatcgccgccgagctcgatatcaac
ctcgagccgactaacccgagacagttcgtcccgcggttttgctccgaactcgacgtcgga
acggatgtcgagtcgaaagcgatcgaaattatcgaggaaacgaccgcacagggacttcat
tccggtaaatcgccgaccggattcgcagcggcggccatctacgccgctggcttactctgt
gacgagacgattccgcaacgagcggtcgctgagaccgctcagacgaccgtcgtcaccgtc
cgaaatcgataccgcgagcaactcgaggcgatcgacgaacaaccgaaagcggctacatga
DBGET
integrated database retrieval system
