Haloferax larsenii: KU306_02930
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Entry
KU306_02930 CDS
T08379
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hls
Haloferax larsenii
Pathway
hls00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KU306_02930 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hls01007
]
KU306_02930 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hls03016
]
KU306_02930 (serS)
Enzymes [BR:
hls01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
KU306_02930 (serS)
Amino acid related enzymes [BR:
hls01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
KU306_02930 (serS)
Transfer RNA biogenesis [BR:
hls03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KU306_02930 (serS)
Prokaryotic type
KU306_02930 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
KfrA_N
APG6_N
DUF7307
Allexi_40kDa
DUF1771
PRTRC_E
Motif
Other DBs
NCBI-ProteinID:
UVE50859
LinkDB
All DBs
Position
complement(559127..560512)
Genome browser
AA seq
461 aa
AA seq
DB search
MIDRKLLRDDPERVRDALDARGNDGVDVDHVLDVYDEWRSLKADGDDLRHERNEVSQKIG
TLKQEGKDEEAQEAIERSSELKEELQELEARADELEAELDEALLEIPNLPHESVPVGTDE
SENVEVRREGFDDLRDLPDEVTPHYDLGEELDIIDEARAAKTTGSGFYFLKGEGAMLEHA
LIQFMLDVHREQDYVDLFPPVPVKTTSMVGTGQLPKFADDAYRIGGSETEDYEDDDLWLC
PTAEVPVTNMYRDEILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNF
VEPEESYDRLEALLDEAAEVLERLGLPYRVLSLCTGDLTFASAKTYDLEVWAPGTESDDS
PDGYGGRWLEVSSASNFEDFQARRAGLRYRPERHESAEYLHTLNASGTAVGRIMVALLEY
YQNEDGTVDVPEVLQPYMGGREVIEGHEPVGEAAVGAGKKD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatagacaggaaactgctccgtgacgacccggagcgtgtccgagacgcactcgacgcc
cgcggcaacgacggggtcgacgtcgaccacgtcctcgacgtgtacgacgagtggcgctcg
ctgaaagcagacggcgacgacctgcgacacgagcgaaatgaggtcagccagaagattggc
acgctcaagcaggagggcaaagacgaggaagcccaggaggctatcgagcggtcgagcgaa
ctcaaagaggaactgcaggaactcgaagcccgcgccgacgaactcgaagcagaactcgac
gaggcactcctcgaaatcccgaacctcccgcacgagtcggtcccggtcggcaccgacgaa
tcggagaacgtcgaagttcgccgcgaggggttcgacgacctgcgtgacctcccggacgag
gtgacaccacactacgacctcggcgaagaactcgacatcatcgacgaggctcgcgccgcg
aagacgaccgggtcgggcttttacttcctcaaaggcgagggcgcgatgctcgaacacgcg
ctcatccagttcatgctggacgtccaccgcgagcaggactacgtggacctcttcccgccg
gtcccggtgaagaccacctcgatggtcggcaccggccagcttccgaagttcgccgacgac
gcctaccgcatcggcgggtcggagaccgaggactacgaggacgacgacctctggctctgt
ccgaccgccgaagtcccggtcacgaacatgtaccgcgacgagattctgctgaaggacgac
ctgccgctgaagcatcaggcgtacacgccgaacttccgccgcgaggccggtgaacacggc
accgagacgcgcggtatcgtccgtgtccaccagttcaacaaggtcgaactcgtcaacttc
gtcgaacccgaggagtcgtacgaccgactcgaagccctcctcgacgaagcggccgaagtc
ctcgaacgactcggcctcccgtaccgcgtgctctcgctttgtaccggcgacctgaccttc
gcctcggcgaagacctacgacctcgaagtctgggcacccggcaccgagtcggacgacagc
cccgacggctacggcggccgctggctcgaagtctcgtcggcctcgaacttcgaggacttc
caggcgcgtcgcgccggccttcgctaccgccccgagcgccacgagtcggccgagtacctc
cacacgctcaacgcgtcgggcacggcggtcggccgcatcatggtcgcgctgctcgaatac
taccagaacgaggacggcaccgtagacgtgcccgaagtcctccagccctacatgggcggc
cgagaggtcatcgagggccacgagccggtcggtgaggcggccgtcggcgctggcaagaaa
gactaa
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