Haloferax larsenii: KU306_04300
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Entry
KU306_04300 CDS
T08379
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hls
Haloferax larsenii
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hls03016
]
KU306_04300 (endA)
Enzymes [BR:
hls01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
KU306_04300 (endA)
Transfer RNA biogenesis [BR:
hls03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
KU306_04300 (endA)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
UVE51109
UniProt:
A0ABY5RG04
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All DBs
Position
complement(838434..839453)
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AA seq
339 aa
AA seq
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MQGRLEDGVVHLPGDARQRFYDSRGYGRPTGGNDLDVAPVEAAHLLSRGDIDSVDGMGLR
DLLAHTGTTLDFVVYKDLRDRGFYLSPAREDWPGVDDPAGADFLVYPRGKGPWDGDVEYR
VRVVGERQPIPVDSLGEVVLAIVDEDGDLTYFDTEGDSPEGTAAEDLPADLDADLLSDRA
LVSTGVDRLYQDGFFGQRLYGRNADSGPLQLSLLEAAYLARQGALDIDADEVVERGREVE
GDRFDRRLSVYTSLREVGTVPKSGFKFGSDFRVYTDFETVDDLSHSEFLVRVVTPDHTFV
PRDLSLDVRLAGGVRKRMVFALTTAKGEIDWLSVSRLTP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggacgcctcgaagacggtgtcgtccacctcccgggcgacgcccgacagcggttc
tacgactcacgggggtacggccgaccgacgggtggcaacgacctcgatgtcgcgcctgtg
gaggccgcacacctcctgtcccgcggtgatatcgacagcgtggatgggatgggtctgcgt
gacctgctcgcccacaccggaaccacgctcgactttgtcgtgtacaaagacctccgcgac
cggggattctatctctcgcctgcgcgcgaggactggccgggcgttgacgacccggcggga
gcggacttcctcgtctacccccgcggcaagggtccgtgggacggcgacgtggagtatcgc
gtccgcgtcgtcggcgagcgccagccgattccggtcgattcgctcggcgaggttgttctc
gccatcgtcgacgaggacggcgacctgacgtacttcgacaccgagggtgattcgcccgag
ggaacggccgcggaggacctccccgcggacctcgacgccgacctgctgtcggaccgcgcg
ctggtctcgaccggggtggaccgcctctaccaggacggcttcttcggtcagcgcctctac
ggccgcaacgccgacagcgggccgctccaactctcgcttctcgaagcggcctacctcgcg
cgacagggtgcactcgacatcgacgccgacgaagtggtcgagcgcggccgggaggtcgaa
ggcgaccgattcgaccgccgcctgtcggtctacacttcccttcgggaggttggaacggtg
cccaaaagcgggttcaagttcggctccgacttccgcgtctacaccgacttcgagacggtg
gacgacctctcacactccgagttcctcgtgcgcgtggtcacgcccgaccacacgttcgtc
ccgcgggacctctcgttggacgtgcgactcgccggcggtgtccgcaagcgaatggttttt
gcgctaaccaccgccaagggagagatagactggctttcggtcagtcggcttacgccatga
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