Haloferax larsenii: KU306_05730
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Entry
KU306_05730 CDS
T08379
Name
(GenBank) choice-of-anchor D domain-containing protein
Organism
hls
Haloferax larsenii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S8
HYDIN_VesB_CFA65-like_Ig
Cep192_D4
Big_13
ASH
PGF-CTERM
DUF1573
Ig_CFAP65_4th
TMEM131_like_N
PapD-like
Motif
Other DBs
NCBI-ProteinID:
UVE51377
LinkDB
All DBs
Position
1115960..1120660
Genome browser
AA seq
1566 aa
AA seq
DB search
MNRLVALAVAVLLLVAPVSGAAMPVPGAAGGGDSISAVSDSTPEPTQTSSTQDTDSANDT
TQGTASANNTSQTNTSTPAPPPAKDTGHPNVEAGLLDDPQSSGFVAEGLGTGPDRVTVVV
EARPGSTTAAAAAVGNAGGEITIRRGTHLQVTLPRSAIRGLAASPAIDLVRTPRRPTTTA
ITSEGLDEMNASALHQRGYTGENVTVAVIDTSFDVTNAEIAGNVVEHHNFSSGDATMANS
SGLHGTAVSELVVDTAPNVSLATYSVGTYTELLAAIDRVESRGDVDVVVMSVSWFGVESL
DGTGPLSQEVASLRANGTLWVNSAGNYGQAHHNVTWSDPDGDDFLNFDGSDELLALDLNG
DLDLRVNWDDWDARTADYDVYVYENETAFQNGNPIAGSTNTQSGSYPPTEVIRGSGSGTI
YVAVHRADAPGTADFDLFFLGDSSAEYVTSARSLTVPAVADATVAVGAVDHDSLALEPYS
SRGPTVDGRLKPDLVAPDKVTTSADSYFAGTSAAAPHAGGVAALVVDAAGEPLSPDELES
ALLGSATKLSGSEPNDQTGYGLVNATGAVERLSVRTVQTCRVIDTPGRYVLDRPLSAAGG
TCLEITSDDVVVEGDDYSVSGDGSGTALSISGTNVTVSNLSVSSVGTAVSLASGANATLD
SISTDASENWTVEAAQQTNYTASLSLAGDNVSVDARAVSLERNASHPAVPASTTRVGAPL
FARSESGAATANFTVTYPEGTENESSLRLHRHTGTEWTPLAGAVDTDANTVTANASSFGP
LAVFELSDPFLAATPTDVSFGSVDVQNSSSTTASVQNLGGRDAAVQSVTVTGPNASAFAV
TEGLPATLAPSATDSLTVTYTPSAIGTHNATLAIEYNGSSSPTNLSLSGSGVDQHAPVVT
NATGESLGANASLVGRTGSVRVTADVTDSVSGVASVTADLSAFGAGTVSLAPNETGTYVA
TADVDETAAASDGAHEIRIRATDAAGNTNESVAGTVVLDATNATLGVDSPANQTANQTTL
SLNGTATDATSGVDHVEWRLDGGSWTELTETQPWNTSVSGLADGTHTLEFRVTDDASNVA
PVVERTVVVDTVAPALGGVSANRTTAVEPGGSLAVDVSVTDATSGVASVEAGGTPLTTNQ
TGASGVVTARSNLGATSLSVVARDAAGNENQTTLDYDVGATATLSAAGSGVFAADLDDSM
LQRVRVNSSDTGVSVRYGTAPTAPASVPAAPGDVVLGYPQLDTNQTAAAVSNASIVVNVS
DQTISSAYALPSTVTVSRFDGSSWVDANATLVETTGGNRSYRVPVSNSSVLAVHASTESD
APNVTDYAPTGTVDAGSVTLSVAYEDGYAGIDPTRVSLLVDGTDVTDSTSVGADGVSYTT
DLGAGSHTAEITVVDRAGNQRTKSWSFETESTGGSSGSSTGGSAGSSSTGGSTGSTGGST
GSTGGGGLAPATSPTTTSTPANQTTTTPNATNTTTVNSTATNTTTATTAPSPENERPSAN
ESASQTQLSNASETQSPAPTEEAAELTTTVTDASDGGSTESDAPGFGPVVALTALVVVGV
LARRRG
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttggttgcgctcgccgtcgccgtcttactgctcgttgcacccgtttccggt
gcagcgatgccagtacccggtgccgctggcgggggcgactcgatatcggcggtgtcggac
tcgacgccagaaccgacgcagacaagttcgacacaggacacggactcggcgaacgacacg
acgcagggaactgcttcagccaacaacacgtcgcagacgaacaccagtactcctgcgccg
ccgccagccaaggacactggccatccgaacgtcgaagccggactgctcgacgacccgcaa
tcgtccggattcgtcgcagagggactcggaactgggcctgaccgcgtgacggtcgtcgtc
gaagcgagaccggggtcgacaaccgccgccgcggcagcggtcggcaacgctggcggtgag
ataaccatccgacgcgggacgcatttgcaggtgacgctcccgcggtcggccatccgtggg
ttggcagcctcgcccgcaatcgacctcgtcagaacgccgcgtcggccgacgacgaccgca
atcacgagcgagggactcgacgagatgaacgcctccgcgctccaccaacgggggtacacc
ggtgagaacgtcaccgtcgccgtcatcgacacctcgttcgacgtgacgaacgccgaaatc
gcgggcaacgtcgtcgaacaccacaacttctccagcggcgacgcgacgatggcgaattcc
tcgggactacacggcactgccgtctccgaactcgtcgtcgacaccgcaccgaacgtctcg
ctcgccacctacagcgtcgggacgtacaccgaactgctggcggcgatagaccgcgtcgaa
tcccgcggcgacgtggacgtcgtcgtcatgtcggtgagttggttcggcgtcgaatcgctc
gacggaaccgggccgctcagtcaggaagtcgcgtccctccgggcgaacgggacgctctgg
gtcaactcggcggggaactacggacaggcccaccacaacgtcacgtggtccgaccccgac
ggcgacgactttctgaacttcgacgggagcgacgaactgctcgcactcgacctgaacggc
gacctcgacctccgagtgaactgggacgactgggacgcgcgcaccgccgactacgacgtg
tacgtctacgagaacgagacggcgttccagaacggcaatccgattgccgggtcgacgaac
acacagagcgggtcgtaccccccgaccgaagtcatcagaggttccgggtcgggaaccatc
tacgtcgccgtccaccgggcagacgcgcccggaaccgccgacttcgacctgttcttcctc
ggcgactcgtcggccgagtacgttacgtcagcccgcagtctgacggttccggcggtcgcc
gacgcgacggtcgccgtgggcgcggtcgaccacgactcgctcgcgctcgaaccgtactcg
tctcgcggcccgaccgtcgatggccgcctgaagcccgacctcgtcgcaccggacaaagtg
accacgtccgccgactcgtacttcgccgggacctccgctgccgccccgcacgctggtggg
gtcgccgcgctcgtcgtcgacgccgccggcgaaccactgtcccccgacgaactcgaatcg
gcgctcctcgggtcggcgacgaagctctccgggtcggaaccgaacgaccagacgggctac
gggctggtcaacgcgaccggcgcggtcgaacgactctccgtcagaacggtacagacgtgc
cgggtaatcgatacgcccgggcggtacgtcctggaccgcccgctctcggccgctggcggc
acctgcctcgaaatcacctccgacgacgttgtcgtcgagggcgacgactacagcgtctcc
ggcgatgggtcgggaacggcgctctccatctcggggaccaacgtcaccgtctcgaacctc
agcgtctcgtcggtcggaacggcagtctctctcgcttcgggggcgaacgcgacgctcgac
tcaatctccaccgatgcgagcgagaactggacggtcgaagcggcacagcagacgaactac
accgcctcactgtcgctcgcgggcgacaacgtctccgtggatgcccgggccgtctcgctc
gaacggaacgcgagccatcccgcagttcccgcctcgacgacgcgagtcggtgctccgctc
ttcgcgcgctccgagtcgggtgccgcaacggcgaatttcaccgtgacgtaccccgaggga
actgagaacgagagttcgcttcgcctccacagacacactggaaccgagtggactcccctc
gcgggggctgtcgataccgacgcgaacaccgtcacggcaaatgcgtcttcgttcggcccg
ctggcggtgttcgaactctccgacccgttcctcgctgccacgccgaccgacgtgtcgttc
ggcagtgtcgacgtccagaactcgtcgtcgacgaccgcctcggtacagaatctcggcggg
agagacgcggcagttcagtcggtcacagtcaccgggccgaacgcctcggcgttcgcggtg
actgagggtctcccggcgacgctcgcccccagcgccactgactcgctcactgtcacgtac
accccgtcagctatcgggacgcacaacgctacgctggctatcgaatacaacggctcgtcg
tcgccgacgaacctctccctttcggggtcgggagtcgaccaacacgcacccgtcgtcacg
aacgcgaccggcgagtcactcggggcgaacgcgtctctcgtcggtcgaaccgggtcggta
cgcgttaccgccgacgtgaccgattcggtgtccggcgtcgcgtcggtgacggccgacctc
tcggcgttcggcgctggcaccgtgtcgctcgcgccgaacgagacggggacctacgtcgcc
actgcggacgttgacgagacggccgctgcgagcgacggcgcacacgagattcgcattcgg
gcgaccgacgctgcgggcaacaccaacgagtctgtcgccggaactgtcgtcttggacgcg
acgaacgcgacgctcggtgtggattcgcccgcgaaccaaacggccaaccagacgaccctc
tcactgaacgggacggccaccgacgcgaccagcggcgtggaccacgtcgagtggcgactc
gacggcggttcgtggactgaactcacagaaacccagccgtggaatacgtcggtgtcggga
ctcgcagacggaactcacacgctcgaattccgcgtcaccgacgacgcgagtaacgtcgcc
cctgtcgtcgagcgaactgtcgtcgtcgacacggtcgcccccgcgctcggcggggtctcg
gcgaaccggacgactgcggtcgaaccgggcgggtcgctcgcagtggacgtctcggtcact
gacgcgacaagcggtgtcgccagcgtcgaggctggcggaaccccgctcaccacgaatcag
acgggcgcgagcggcgtcgtcacggctcgctccaacctcggtgccacatccctctcggtc
gtcgcacgcgacgccgcaggcaacgagaaccagacgacgctcgactacgatgtcggggcg
actgcgacgctctcggcggctggttctggcgttttcgccgcggacctcgacgattcgatg
cttcaacgcgtgcgcgtgaactcctccgacactggtgtctcggtacgctacggaactgcg
ccgacggcacctgcgtcagttcctgctgcgcccggtgacgtggtgctgggctatccgcaa
ctcgacacgaaccagacggcggccgcggtgtcgaacgcgagcatcgtcgtgaacgtctcc
gaccagacgatttcgtcggcctacgcgttgccgtcgacagtcacggtttcgcggttcgac
ggcagttcgtgggtcgatgcgaacgcgaccctggtcgagacgaccggtgggaatcggtcc
tatcgagtgccggtttcgaacagttcggtgctcgcggtccacgccagcacggagtccgac
gcgccgaacgtgaccgactacgcgccgaccggaaccgtcgatgcaggctcggtgacgctc
tcggtcgcctacgaagacggctacgctggcatcgaccccacccgcgtctcgcttctggtc
gatggaaccgacgtgaccgactcgaccagcgtcggcgccgacggggtctcgtacacgacc
gacctcggtgccggaagtcacacagccgagattacggtcgtcgaccgcgcggggaaccag
cgaaccaaatcgtggtcgttcgagaccgagtctactggcgggtcgtcggggagttcgacg
ggcggctcggccggaagcagttcgacggggggaagtacaggttcgaccggcggaagcaca
ggctcgaccggtggtggcggcctcgcacctgcaacgtcaccaactacgacctccacgccc
gcaaatcagacgaccaccactccgaacgcgacgaacacgacgaccgtcaactcgactgcg
acgaacacgacgactgcgacgacagcaccaagccccgaaaacgagaggccgagcgcaaac
gaatcggcgtcacagacacagctgtcgaacgcatcggagacccagtctcctgcacccacc
gaggaagctgcggagttgacgacgaccgtcacagatgctagcgacggcggctcgacagag
agtgacgcgccgggcttcggacccgtggtagcactcacggcactcgtggtcgtgggtgtc
ctcgcccggcgacgcgggtag
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