Haloferax larsenii: KU306_06285
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Entry
KU306_06285 CDS
T08379
Name
(GenBank) PAS domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hls
Haloferax larsenii
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hls03000
]
KU306_06285
Transcription factors [BR:
hls03000
]
Prokaryotic type
Helix-turn-helix
Other families
KU306_06285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS
PAS_4
PAS_3
GAF_2
PAS_8
GAF_3
Sigma70_r4_2
Sigma70_r4
GAF
DUF134
TMEM132_3rd
Xre-like-HTH
HTH_11
HTH_24
Response_reg
Motif
Other DBs
NCBI-ProteinID:
UVE51483
LinkDB
All DBs
Position
1213528..1215513
Genome browser
AA seq
661 aa
AA seq
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MSIASPQARVFSVVGDDIRARVERELSSFDVEAVDSADAVERRLAEDSADCIVIDTDSPA
TVTAISETGVPVVVLVSPDADLSPGDALDAGAEDVVPVVESNLFDRLGARVASVVSWHDR
HEEATDRITEDLKERAMDEAPVGITISDGSLPDHPLVYANDAFESMTGYTIEEALGRNCR
YLQGDKTNQERVAELRRAIDAEESASVELLNYRRDGSTFWNRVDIAPLPGPDGSVTHYVG
FQTDITERVRAEQAAERYAARVEEERARLQNLVDHIEGLLEDVTGALVRAETRAELETTV
CEKIAASPSFEGAWIGDVDLSPKEIVPNEWAGAESATLSELRIDRDDDTDPTALAATTGE
VRSQTASDGRLHTDVSLPFTNVIAVPLVHRDTMYGVLSVYATAAVDEYVQAVFGTLGRAV
GAAIDAFESRRTLMSNEVLELELEITDSTQPLATLATSWGCRLEYEGSVPHDDGTVSLFV
STTPPTAGEDIDTEETSEFGAEGIVRVSQLPRGDDAGLYEIILASDSLLHLVADASGRIS
DLEVDTDGTRLTVVVPDRALGRSLLDDLKTVARGVELRAVRDRAVPPQTQREFAASVGAE
LTDRQRTALQLAYLGGFFEWPHGVKGDELAEAMGVSRPTYHQHLRAAERKLVTRFFESEV
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgcttcgccgcaggcgcgtgtcttctctgtcgtcggcgacgacatccgagca
cgagtcgaacgcgaactctcgtcgttcgacgtcgaagccgtcgactcggccgacgctgtc
gagcgacgactcgccgaagactctgcggactgcatcgtcatcgacacggactcaccagca
accgtgacagccatcagcgagactggcgttccggtcgtcgtactggtctctccggacgcc
gacctctcgccgggtgacgcactcgatgccggtgcggaagacgtcgttcccgtcgtcgag
tctaacctcttcgaccgactcggtgcccgcgtcgccagcgtcgtgtcgtggcacgaccgt
cacgaggaggcgacagaccggattaccgaagacctgaaagaacgggcgatggacgaagcg
cccgtcggaatcactatctcggacggctcgctccccgaccacccgctcgtctacgccaac
gacgcgttcgagtcgatgacggggtacaccatcgaagaggcgctgggtcgaaactgccga
tatctgcagggtgacaagacgaaccaagagcgcgtcgccgaacttcgccgcgcaatcgat
gccgaggagtcggcgtcggtcgaactgctgaactaccggcgagacggctcgaccttctgg
aatcgcgtcgatatcgcgccgcttcccggtcccgatggctccgtgacccactacgtcggt
ttccagacggacatcacagagcgcgtccgcgccgagcaggccgcagagcggtacgccgcc
cgcgtcgaagaagaacgcgcccgactccagaatctcgtcgaccacatcgaagggctgctc
gaagatgtcacgggcgcgctcgtccgcgcggagacgcgcgcggaactcgaaacgacagtg
tgtgagaaaatcgccgcatcgccgtcgttcgagggcgcgtggattggcgacgtcgacctc
tcaccgaaggaaatcgtgccgaacgagtgggccggagccgaatcggccacgctgtcggaa
ctccgaatcgaccgcgacgacgacaccgacccgaccgcgctcgccgccacgaccggggag
gtacggtcacagacggcttcggatggccgcctccacaccgacgtgtcgctgccatttacg
aacgttatcgccgtcccgctcgtccaccgtgatacgatgtacggtgtgttgagcgtgtac
gcgacagcggccgtcgacgagtacgtgcaggccgtcttcgggacgctcggcagagcagtt
ggggccgccatcgacgcgttcgagagccgacggacgctcatgtccaacgaggttctcgaa
ctcgaactcgaaatcacggactcgacacagcccctcgccacgctcgccacctcgtgggga
tgtcggctcgaatacgaagggtcggttccgcacgatgacgggacggtgagcctcttcgtc
tcgacgacgcccccgaccgccggcgaggatatcgacaccgaagaaacgtccgaattcggt
gctgagggtatcgtacgcgtctcgcaactcccgcggggagacgacgccggactgtacgaa
atcattctcgcatcagattcgcttttacacctcgtcgccgacgcgagcggccggatatca
gacctcgaagtcgacaccgacgggacccgactgaccgtcgtagtcccggaccgcgcactc
ggtcggtcgcttctcgacgacctgaaaacggtcgcacggggtgtcgagctccgtgccgtc
agggaccgtgcggtcccgccgcagacccagcgagagtttgccgcgagcgtcggtgcagaa
ctcaccgacagacagcgaactgcgctccaactggcgtacctcggcggcttcttcgagtgg
ccccacggggtgaaaggcgacgaactcgccgaggcgatgggtgtctcccgaccgacgtac
caccagcatctccgtgcggccgagcgaaagctggtcactcggtttttcgagagcgaggtt
ctgtag
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