KEGG   Haloferax larsenii: KU306_06285
Entry
KU306_06285       CDS       T08379                                 
Name
(GenBank) PAS domain-containing protein
  KO
K06930  HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hls  Haloferax larsenii
Brite
KEGG Orthology (KO) [BR:hls00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hls03000]
    KU306_06285
Transcription factors [BR:hls03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    KU306_06285
SSDB
Motif
Pfam: BAT PAS_9 HTH_10 PAS PAS_4 PAS_3 GAF_2 PAS_8 GAF_3 Sigma70_r4_2 Sigma70_r4 GAF DUF134 TMEM132_3rd Xre-like-HTH HTH_11 HTH_24 Response_reg
Other DBs
NCBI-ProteinID: UVE51483
LinkDB
Position
1213528..1215513
AA seq 661 aa
MSIASPQARVFSVVGDDIRARVERELSSFDVEAVDSADAVERRLAEDSADCIVIDTDSPA
TVTAISETGVPVVVLVSPDADLSPGDALDAGAEDVVPVVESNLFDRLGARVASVVSWHDR
HEEATDRITEDLKERAMDEAPVGITISDGSLPDHPLVYANDAFESMTGYTIEEALGRNCR
YLQGDKTNQERVAELRRAIDAEESASVELLNYRRDGSTFWNRVDIAPLPGPDGSVTHYVG
FQTDITERVRAEQAAERYAARVEEERARLQNLVDHIEGLLEDVTGALVRAETRAELETTV
CEKIAASPSFEGAWIGDVDLSPKEIVPNEWAGAESATLSELRIDRDDDTDPTALAATTGE
VRSQTASDGRLHTDVSLPFTNVIAVPLVHRDTMYGVLSVYATAAVDEYVQAVFGTLGRAV
GAAIDAFESRRTLMSNEVLELELEITDSTQPLATLATSWGCRLEYEGSVPHDDGTVSLFV
STTPPTAGEDIDTEETSEFGAEGIVRVSQLPRGDDAGLYEIILASDSLLHLVADASGRIS
DLEVDTDGTRLTVVVPDRALGRSLLDDLKTVARGVELRAVRDRAVPPQTQREFAASVGAE
LTDRQRTALQLAYLGGFFEWPHGVKGDELAEAMGVSRPTYHQHLRAAERKLVTRFFESEV
L
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgtcaattgcttcgccgcaggcgcgtgtcttctctgtcgtcggcgacgacatccgagca
cgagtcgaacgcgaactctcgtcgttcgacgtcgaagccgtcgactcggccgacgctgtc
gagcgacgactcgccgaagactctgcggactgcatcgtcatcgacacggactcaccagca
accgtgacagccatcagcgagactggcgttccggtcgtcgtactggtctctccggacgcc
gacctctcgccgggtgacgcactcgatgccggtgcggaagacgtcgttcccgtcgtcgag
tctaacctcttcgaccgactcggtgcccgcgtcgccagcgtcgtgtcgtggcacgaccgt
cacgaggaggcgacagaccggattaccgaagacctgaaagaacgggcgatggacgaagcg
cccgtcggaatcactatctcggacggctcgctccccgaccacccgctcgtctacgccaac
gacgcgttcgagtcgatgacggggtacaccatcgaagaggcgctgggtcgaaactgccga
tatctgcagggtgacaagacgaaccaagagcgcgtcgccgaacttcgccgcgcaatcgat
gccgaggagtcggcgtcggtcgaactgctgaactaccggcgagacggctcgaccttctgg
aatcgcgtcgatatcgcgccgcttcccggtcccgatggctccgtgacccactacgtcggt
ttccagacggacatcacagagcgcgtccgcgccgagcaggccgcagagcggtacgccgcc
cgcgtcgaagaagaacgcgcccgactccagaatctcgtcgaccacatcgaagggctgctc
gaagatgtcacgggcgcgctcgtccgcgcggagacgcgcgcggaactcgaaacgacagtg
tgtgagaaaatcgccgcatcgccgtcgttcgagggcgcgtggattggcgacgtcgacctc
tcaccgaaggaaatcgtgccgaacgagtgggccggagccgaatcggccacgctgtcggaa
ctccgaatcgaccgcgacgacgacaccgacccgaccgcgctcgccgccacgaccggggag
gtacggtcacagacggcttcggatggccgcctccacaccgacgtgtcgctgccatttacg
aacgttatcgccgtcccgctcgtccaccgtgatacgatgtacggtgtgttgagcgtgtac
gcgacagcggccgtcgacgagtacgtgcaggccgtcttcgggacgctcggcagagcagtt
ggggccgccatcgacgcgttcgagagccgacggacgctcatgtccaacgaggttctcgaa
ctcgaactcgaaatcacggactcgacacagcccctcgccacgctcgccacctcgtgggga
tgtcggctcgaatacgaagggtcggttccgcacgatgacgggacggtgagcctcttcgtc
tcgacgacgcccccgaccgccggcgaggatatcgacaccgaagaaacgtccgaattcggt
gctgagggtatcgtacgcgtctcgcaactcccgcggggagacgacgccggactgtacgaa
atcattctcgcatcagattcgcttttacacctcgtcgccgacgcgagcggccggatatca
gacctcgaagtcgacaccgacgggacccgactgaccgtcgtagtcccggaccgcgcactc
ggtcggtcgcttctcgacgacctgaaaacggtcgcacggggtgtcgagctccgtgccgtc
agggaccgtgcggtcccgccgcagacccagcgagagtttgccgcgagcgtcggtgcagaa
ctcaccgacagacagcgaactgcgctccaactggcgtacctcggcggcttcttcgagtgg
ccccacggggtgaaaggcgacgaactcgccgaggcgatgggtgtctcccgaccgacgtac
caccagcatctccgtgcggccgagcgaaagctggtcactcggtttttcgagagcgaggtt
ctgtag

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