Haloferax larsenii: KU306_06445
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Entry
KU306_06445 CDS
T08379
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hls
Haloferax larsenii
Pathway
hls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KU306_06445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hls03021
]
KU306_06445
Enzymes [BR:
hls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KU306_06445
Transcription machinery [BR:
hls03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
KU306_06445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UVE51511
UniProt:
A0ABY5RGK9
LinkDB
All DBs
Position
1243889..1246810
Genome browser
AA seq
973 aa
AA seq
DB search
MSIQTPKEIGSIQFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLQ
CRTCGQHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRSTCRECGRLALTQEEADDYRDK
LGRTKELGDDWSDVMKSAVRQARKAHRCPHCSSPQHDIKHEKPTTYYEVQNVLAGDFSER
IAEAMQPDPDDEDDEGISPVDLAEKADLPAERVNQVLAGEFRPVGDDRKALEKALGIDLT
EEDMNKLMPSDIRDWFEDIPDEDLVTLGIDPDRSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFIDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVATEMT
QTMNVTDRNIDEARQYVRNGPESHPGANYVRRPDGRRLKVTEKNCEELAEKVEVGWEVNR
HLVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHDNPHFVETQALDLLRATR
VDTLPEPAGEDDDGTPYWTGHQIFSELLPDDLNMEFTSKVGDTVVIEDGQLLEGTIDEDA
VGAFGGEIVDVLAKDYSKTRSRIFINEIASLAMRAIMHFGLSIGIDDESIPDEATAQVDE
AIDAAYDKIQELIEIYEAGELESLPGRSVDETLEMKIMQRLGKARDSAGEIAEDHFDEDN
PAVVMSKSGARASMLNLTQMAGCVGQQAVRGERINRGYEERTLSHYQKGDLSAEAHGFVE
NSYCAGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGSVRDTSG
TIVQFEFGEDGTSPVKVSSGDDKPIDVDAIADRVVDAEFSSDEEKERFLGERAPKTNLSE
HGVSARAEVESDD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatacagacacccaaagaaatcggaagtatccagttcgggttgatggacccggag
acgtaccgagacatgtccgcgacgaaggtcatcaccgcggacacctacgacgacgacggt
taccccatcgacatgggtctcatggacccgcgtctgggcgtcatcgaccccggtctgcag
tgccgcacctgcggccagcactcggggtcgtgcaacggtcacttcggccacatcgaactg
gccgcccccgtcatccacgtcggtttcacgaagctcatccgtcgcctgctccgctcgacg
tgtcgcgagtgcggtcgcctcgcgctcacgcaggaagaagcagacgactaccgcgacaaa
ctcggtcgcacgaaggaactcggcgacgactggagcgacgtgatgaagtcggcagttcgg
caggcccgcaaggcccaccgctgcccgcactgcagttcgccgcagcacgacatcaaacac
gagaagccgacgacctactacgaggtccagaacgtgctcgccggggacttctccgagcgc
atcgccgaagcgatgcagccggaccccgacgacgaggacgacgaaggcatctcgccggtc
gacctcgccgagaaggccgacctcccggcagagcgcgtcaaccaagtgctcgccggtgag
ttccgccccgtcggcgacgaccgcaaggcgctggagaaggcactcggtatcgacctgacc
gaagaggacatgaacaagctgatgccctcggacatccgcgactggttcgaggacatcccg
gacgaggacctcgtcacgctcggtatcgaccccgaccggtcgcgccccgagtggatgatt
ctgaccgtcctccccgtcccgccggtcaccgctcgaccgtcgattacgctcgacaacggc
cagcgctccgaggacgacctgacccacaagctcgtcgacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggccggtgcgccgcagctgattatcgaggacctgtgggaactg
ctccagtaccacgtcaccacgttcatcgacaacgagatttcgggaacaccgccggcacgt
caccgctccggccgcccgctcaagacgctcagccagcgtctgaaagggaaggaaggtcgc
ttccgtggctcgctgtccggtaagcgtgtcaacttctccgcgcgtaccgtcatctcgccg
gacccgacgctctcgctcaacgaggtcggtgtcccggaccgcgtcgccaccgagatgact
cagacgatgaacgtcaccgaccgcaacatcgacgaggctcgacagtacgtccgtaacgga
cccgagagccaccccggtgcgaactacgtccgtcgtcccgacggccgtcgcctgaaggtg
acagagaagaactgcgaggaactcgcagagaaggtcgaagtcggctgggaggtcaaccgc
cacctcgtcgacggcgacatcgttatcttcaaccgacagccatcgctgcaccggatgtcc
atcatggcgcacgaagtcgtcgtgatgccgtacaagacgttccgcctgaacactgtcgtc
tgcccgccgtacaacgcagacttcgacggcgacgagatgaacatgcacgccctccagaac
gaggaagcccgtgccgaggcgcgcgtcctcatgcgcgtccaagagcagattctctcgccc
cgcttcggtgagaacatcatcggggccattcaggaccacatttcgggtacgtacctgctg
acccacgacaacccgcacttcgtcgagacgcaggcgctcgacctgcttcgcgcgacgcgc
gtggacacgctccccgaacccgcaggcgaagacgacgacggcaccccgtactggacggga
caccagatcttctccgaactcctgcctgacgacctgaacatggagttcacgtcgaaggtc
ggcgacaccgtcgtcatcgaggacggtcaactcctcgaaggcaccatcgacgaggacgca
gtcggtgccttcggtggcgagattgtggacgtgctcgcgaaggactactcgaagacgcgc
tcgcgcatcttcatcaacgagattgcctcgctggcgatgcgcgccatcatgcacttcggg
ctgtctatcggtatcgacgacgagtcgattccggacgaagcgaccgcacaggtcgacgaa
gccatcgacgccgcctacgacaagattcaggaactcatcgagatttacgaggcgggcgaa
ctcgaatcgctgcccggtcgctcggtcgacgagacgctcgaaatgaagattatgcagcgt
ctcggcaaggcacgtgactctgctggtgaaatcgcagaggaccacttcgacgaggacaac
ccggcagtggtgatgtccaagtccggtgcgcgtgcatccatgctcaacctgacgcagatg
gctggctgtgtcggccagcaggcagttcgtggcgagcgcatcaaccgcgggtacgaagag
cgtaccctgagccactaccagaaaggcgacctctcggcagaggcccacggcttcgtcgag
aactcctactgtgccggtctcaccccgcgtgagttcttcttccacgcgatgggtggccgc
gaggggcttgtcgacactgcagtccgtacctcgaagtccgggtacctgcagcgtcgtctc
atcaacgccctgtccgaactcgaagcgcagtacgacggctccgtccgagacacctcgggc
accatcgtccagttcgaattcggtgaagacggcacgagtccggtgaaggtctcgtcgggc
gacgacaagccaatcgacgtcgacgccatcgcggaccgtgtcgtcgatgcggagttcagc
tccgacgaagagaaagaacggttcctcggcgagcgcgcgccgaagacgaacctctccgag
cacggcgtctcggcccgtgcggaggtggaatccgatgactga
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