Haloferax larsenii: KU306_07470
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Entry
KU306_07470 CDS
T08379
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hls
Haloferax larsenii
Pathway
hls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KU306_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hls03400
]
KU306_07470
Enzymes [BR:
hls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KU306_07470
DNA repair and recombination proteins [BR:
hls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KU306_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UVE51700
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All DBs
Position
1439452..1440294
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AA seq
280 aa
AA seq
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MRVGAHVSIAGGVDNAVENQLDVGGNCGQIFTHSPQVWQDPNIGDDEADAFRTGTGDSLK
GPWVIHTSYLVNLCTPKDGLREKSLDSMQKEVDAAAKLDIPYVNVHLGAHTGAGVDGGLD
NAVSVLDEIDVPDGVTILIESDAGSGTKLGGDFAHLGYVLEESKQDLDICLDTAHAFAAG
YDLSTPEGVDETFEELDAEVGLEHLKCVHLNDSKHECGTNKDEHAHIGEGLIGEEGMRAF
INHDAIVDNEVPLVLETPTEDGKSFAWNIDRVRELRADEN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtaggagcacacgtctctatcgccggtggcgtcgacaacgcggtcgaaaaccaa
ctcgacgtcggcgggaactgtggacagatattcacccactcaccacaggtctggcaggac
cctaacatcggcgacgacgaagccgatgccttccgaaccggaacgggcgactctctgaaa
ggaccgtgggtcatccacacctcctacctggtcaacctctgtacgccgaaagacggcctc
cgcgagaagtccctcgactccatgcagaaggaagtcgacgcggcggccaaactcgacatc
ccctacgtgaacgtccacctcggtgcccacaccggcgcgggcgtggacggcggcctcgac
aacgccgtctccgtcctcgacgaaatcgacgttcccgacggtgtgacgattctcatcgag
tccgacgccgggtccggaaccaaactcggtggcgacttcgcccacctcgggtacgtcctc
gaagagtccaaacaggacctcgacatctgtctcgacaccgcccacgcgttcgccgcgggc
tacgacctctcgacgcccgaaggtgtcgacgagacgttcgaggaactcgacgccgaagtc
ggtctggagcacctcaagtgcgtccacctgaacgactcgaaacacgaatgcgggacgaac
aaggacgaacacgcccacatcggcgagggcctcatcggcgaggaaggcatgcgcgcgttc
atcaaccacgacgccatcgtcgacaacgaggttccgctcgtcttggagacgccgacggaa
gacggcaagagtttcgcgtggaacatcgaccgcgttcgtgaactccgcgccgacgaaaac
taa
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