Haloferax larsenii: KU306_07875
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Entry
KU306_07875 CDS
T08379
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hls
Haloferax larsenii
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hls03016
]
KU306_07875 (truD)
Enzymes [BR:
hls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KU306_07875 (truD)
Transfer RNA biogenesis [BR:
hls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KU306_07875 (truD)
Prokaryotic type
KU306_07875 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UVE51771
LinkDB
All DBs
Position
complement(1518842..1520188)
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AA seq
448 aa
AA seq
DB search
MREAHPTERAVGIDHYVSDADGIGGVLRVEPEDFGVREVELDSLNIRPPDAPTGDFPNLV
LRVTLRGWDTNDFAGHLSDELGVSRERVSWAGTKDKHAVTTQLFTVHGGDADDVPEIRNA
DIEVVGRLGRTLDFGDLAGNHFRIRVRNPDHPENVADITDSLREFGGRDGMVGVPNYFGH
QRFGSIRPITHTVGLHVVRGEWREAVLAYCGGPTEDEPEETQKGRAIVDEEAASADPDWH
RALDAIPGYLGYERGMLHRLAEDGAETDDDWRNALESVPSNLQRLFVNAAQSYVFNQILS
ERLDRGLPFDSPIEGDVVAFADRDAPDGIEIPDVSRLQSATGRRVDVMARHIERGRAFVT
APLVGTETELAEGEQGDIEREVLDDLDLEPADFDLPGNFRSTGTRRAILVRTDLTVEDES
LVFDFGLPHGSYATAVMREYLKAGPLDL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcgcaccccacagagcgggcggtcggtatcgaccactacgtgagtgacgcc
gacggcatcggcggcgtgctccgcgtcgaacccgaggacttcggcgtccgagaagtcgaa
ctcgactcgctgaacattcgcccgccggacgcgccgaccggcgacttcccgaatctcgtc
ctccgcgtcacgctccgcggctgggacaccaacgacttcgcaggccacctctctgacgaa
ctcggcgtcagcagagagcgcgtctcgtgggcgggcacgaaagacaaacacgcagtcacg
acccagctattcacggtccacggcggcgacgccgacgacgtgcccgagattcgaaacgcc
gatatcgaagtcgtcggccgactcggccggacgctcgacttcggcgacctcgcgggcaac
cacttccgtattcgcgtccgcaaccccgaccaccctgagaacgtcgcggacatcaccgac
tcgctccgcgagttcggcggtcgcgacggcatggtcggcgtccccaactacttcggccac
cagcgattcggcagtatccgacctattacccacacagtcggcctgcacgtcgtccgcggc
gagtggcgcgaggccgtcctcgcgtactgcggcgggccgaccgaagacgaacccgaggag
acgcagaaaggccgggccatcgtcgacgaggaagcggcctcggccgacccggattggcac
cgcgcgctcgacgcgattccgggctacctcggctacgagcgcggcatgctccaccgactc
gcagaagacggcgcggagaccgacgacgactggcgaaacgcgctcgaatcggtgccctcg
aacctccagcgcctgttcgtcaacgccgcgcagtcgtacgtcttcaaccagatactctcg
gagcgactcgaccgcggcctccccttcgacagcccaatcgagggcgacgtcgtggccttc
gccgaccgcgacgccccggacggaatcgagattccagacgtgagccgtctccagtcggcc
accggccgccgagtggacgtgatggcccgccacatcgagcgcggccgggcgttcgtcacg
gcacccctcgtcggcaccgagacggaactcgccgagggcgagcagggcgatatcgaacgc
gaggttctcgacgacctcgacctcgaacccgccgacttcgacctccccggaaacttccgt
tcgaccgggacgcgacgggcgattctcgtccgcacggacctgacggtcgaagacgagagt
ttggtcttcgacttcggcctcccgcacgggtcgtacgcgaccgccgtgatgcgcgagtat
ctgaaggccgggccgctcgacctctga
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