Haloferax larsenii: KU306_07970
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Entry
KU306_07970 CDS
T08379
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hls
Haloferax larsenii
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hls03032
]
KU306_07970
03400 DNA repair and recombination proteins [BR:
hls03400
]
KU306_07970
Enzymes [BR:
hls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KU306_07970
DNA replication proteins [BR:
hls03032
]
Prokaryotic type
DNA Topoisomerases
KU306_07970
DNA repair and recombination proteins [BR:
hls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KU306_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
Cdd1
HHH
DUF4332
IMS_HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UVE48882
LinkDB
All DBs
Position
complement(1535779..1538337)
Genome browser
AA seq
852 aa
AA seq
DB search
MSRGPDLIITEKDNAARRIADILSGETASAERMNGVNVYKWGGKRCIGLSGHVVGVDFPP
EYNDWRDVEPVELISAPVEKHPTQENIVAALRRLARKAGNVTIATDYDREGELIGKEAYE
LVREVNEDVPVDRVRFSSITKREVTEAFENPDELDFDLAAAGEARQIIDLVWGAALTRFL
SLSARQLGNDFISVGRVQGPTLKLIVDREREIEAFDPEDYWELFSELTKDADGAAESFEA
QYFYLDDDGTEAERIWDEDAAQEAYEDLLGVDAAEVTAVKRRTRTDKPPAPFNTTQFIRA
AGSIGYSAQRAMSIAEDLYTAGYITYPRTDNTVYPDDLDPRELLGAFEGDRRFKEDAESL
LEQEEIEPTEGDNETTDHPPIHPTGELPSASDLDEDEWDVYELVVRRFFATVAEDAVWEH
LRVVAEAAGRTLKANGKRLLEPGYHAVYPYFNSTESFVPDVEEGEELQLSDTHLDAKQTQ
PPRRYGQSRLIETMEQMGIGTKATRHDVIQKLYDRGYIESDPPRPTRLARAVVEASEDFA
KLIVSEEMTSQLESDMMAIARGEASLEDVTEESKEILEDVFEGLMESREELGKQLQDSLK
ADKTVGPCPECDGDLVVRKSRRGSYFIGCDSYPDCTNTLPLPSTGKPLIMEDTCDEHDLH
HIKMLAGRKTFVHGCPLCKAEEADEEEDLVIGSCPECGEGATSQDEGDETAEAGGELAIK
RLRSGSRLVGCTRYPDCDYSLPLPRRGDIEVTDESCDEHDLPELRITYDGDREPWELGCP
ICNYREYQAQQNGDGGSELESIKGIGAKTAEKLKDAGYEDVKTLKAAEPDDVAENVEGVG
ADTVRKWQAAAD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcggccccgacctcatcatcacggagaaggacaacgccgcgaggcgtatcgcc
gacatcttgagcggcgagacagcctccgcagagcgaatgaacggcgtgaacgtctacaag
tggggcgggaagcgctgtatcggcctgtccggccacgtcgtcggcgtcgacttcccgccg
gagtacaacgactggcgcgacgtcgagccggtcgagctcatcagcgctcccgtcgagaag
cacccgacccaagagaacatcgtcgccgccctccgacgcctcgcccgcaaggcggggaac
gtcaccatcgcgacagactacgaccgggagggtgaactcatcggcaaggaggcgtacgaa
ctcgtccgcgaggtcaacgaggacgtccccgtcgaccgggttcgcttctcgtcgattacg
aaacgcgaagtgaccgaggcgttcgagaaccccgacgaactcgacttcgacctcgcggcc
gccggcgaggcgcgacagattatcgacctcgtgtggggcgctgccctcacgcgcttcctc
tcgctttcggctcgccaactcggcaacgacttcatctccgtcggccgcgtccaagggccg
accctgaagctcatcgtcgaccgcgagcgcgaaatcgaggcgttcgaccccgaggactac
tgggagctgttctccgaactcacgaaggacgccgacggggccgccgagtccttcgaagcc
cagtacttctacctcgacgacgacggcaccgaagccgaacgcatctgggacgaagacgcc
gcacaggaggcctacgaagacctcctcggtgtcgatgccgccgaggttacggcggtcaaa
cgacgcacccgaaccgacaagccgcccgcgccgttcaacaccacccagttcatccgcgcc
gccgggtctatcggctactccgcccagcgggcgatgagcatcgccgaggacctctacacc
gccggttacatcacctacccccggactgacaacaccgtctaccccgacgacctcgacccg
cgcgaactgctcggcgcgttcgaaggcgaccgccgtttcaaagaggacgccgagtcgctc
ctcgaacaggaggaaatcgaacccaccgagggcgacaacgagacgaccgaccacccaccg
attcacccgactggcgaactcccctcggcgtcggacctcgacgaggacgagtgggacgtg
tacgaactcgtcgtccggcgcttcttcgccaccgtcgccgaagacgccgtgtgggaacac
ctccgcgtcgtcgccgaggcggccggtcgcaccctgaaggccaacggcaagcgcctgctc
gaaccgggctaccacgcggtctatccgtacttcaactccaccgagtcgttcgtccccgac
gtcgaggaaggcgaggaactgcagctttcggacactcacctcgacgccaagcagacccaa
ccgccccgtcgctacggccagtcgcgcctcatcgagacgatggagcagatgggcatcggg
acgaaagcgacccgtcacgacgtgattcagaagctctacgaccgcggctacatcgagagc
gacccgccgcgtcccacccgtctcgcacgggcggtcgtggaggcctccgaggacttcgcc
aaactcatcgtcagcgaggagatgacctcgcaactcgaatccgacatgatggccatcgcc
cgcggcgaggccagcctcgaagacgtgaccgaggagtccaaggaaatcctcgaagacgtg
ttcgagggcctgatggagtcccgcgaggaactcggtaaacagcttcaggactccctgaag
gccgacaagacggtcggtccgtgtcccgagtgcgacggcgacctcgtcgtccgaaagagt
cgccgcgggtcgtacttcatcggctgtgactcctaccccgactgtacgaacacgcttccg
cttccctccacgggcaagccgctcatcatggaggacacgtgcgacgaacacgacctccac
cacatcaagatgctcgccgggcgcaagacgttcgtccacggctgtccgctgtgtaaggcc
gaagaggccgacgaagaggaagacctcgtcatcggctcgtgtcccgagtgtggggagggt
gcgacgtcgcaagacgaaggcgacgaaaccgccgaggcgggcggcgaactggcaatcaag
cgcctccgctccggctctcggttggtcggctgtacccgctatccggactgcgactactcg
cttccgctcccccgtcgcggcgacatcgaagtgaccgacgagtcgtgtgacgaacacgac
ctgccggaacttcgcatcacctacgacggcgaccgcgaaccgtgggaactcggctgtccc
atctgcaactaccgcgagtatcaggcccaacagaacggcgacggcgggtccgagttagag
agcatcaagggcatcggcgcgaagaccgccgagaaactgaaagacgctggctacgaggac
gtgaagacgctgaaggccgccgagcctgacgacgttgctgagaatgtcgagggcgtgggt
gcggatacggttcggaagtggcaggcggcggctgactaa
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