Haloferax larsenii: KU306_08845
Help
Entry
KU306_08845 CDS
T08379
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hls
Haloferax larsenii
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hls03400
]
KU306_08845
DNA repair and recombination proteins [BR:
hls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KU306_08845
Archaeal homologous recombinant proteins
KU306_08845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_27
AAA_29
TMF_TATA_bd
Baculo_PEP_C
ABC_ATPase
COG4_N
ABC_tran
CCDC93_CC
Mod_r
Fib_alpha
SlyX
NPV_P10
DUF3584
DUF1664
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
UVE49045
LinkDB
All DBs
Position
1697765..1700446
Genome browser
AA seq
893 aa
AA seq
DB search
MRFTRVSLRNFKPYEDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKALDGTLEDV
VTTGEDDAEITLEFVHAGGQYRIDRRVRVSGDRATTAKCVLEGPDETIEGARNVRKAVAS
LLRMDNEAFVNCAYVQQGEVNKLINATPSQRQDMIDGLLQLGKLETYRERAGDARLGVQD
VLTSKRSVLEDVESQIETKEDENLHSRLNALESELSEVTSKIERYEDQRDKARQTLEAAQ
STLDEHEEKRERLAEVESAIDELKEKIADDETTRDRLTERIRELDENVDELDDSIAAAVS
KTDLDEASDDALAAARETLDDREAEIREELSDARTKAQALTTQADRLKERAEDLESRAKE
KRESADEDEAAAGDAAADLDELRETRADIESSLASIDERFEDAPVERGEAADLLAERRDT
LSETRESLAETETELKNARERLAEARELRDAGKCPECGQPVDESPHVDAIAEREAAVESL
EAKCESLESKVESCRSAVEAAKQLEDAESRAASLEDRLSLAEERIVDHEETVESRRDAAE
TKREEATELEADAEEKREAAATQADRAATVKETVTELESDLEALSDRRDDLDRVESLLDD
REAAIDDRDRLREKRETLAEVNDERREHLQDRRDRRADLREAVDEDAVEDARSRKQKAES
YIEQVESDVLPDLREKRDDLQSKIGGVKADLERLSELRERREELAERVDALQSLHDEVTD
LESTYGDLRAELRQRNVEILERMLNETFDLVYGNDAYSRIRLDGEYGLTVFQKDGTALQP
EQLSGGERALFNLSLRCAIYRLLAEGIDGAAPLPPLILDEPTVFLDDGHVSRLVNLVEEM
QRRGVKQILIVSHDDELVGAADDLVRVEKNPTTNRSSVERTDAPDLQSALADD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagattcacgcgcgtttctctccggaacttcaagccctacgaggacgccgaactcgac
ctccgagacggcgtcacggtcatccacggcgtcaacgggagcggaaaatcgtccctcctc
gaagcgtgtttcttcgcgctctacgggtcgaaggcactcgacgggacgctcgaagacgtg
gtgacgaccggcgaagacgacgccgagataacactggagttcgtccacgcgggcggccag
taccgcatcgaccgccgggttcgtgtctcgggagaccgcgcgacgacggccaagtgcgtc
ctcgaaggccccgacgagactatcgagggtgcgcgcaacgttcgcaaggccgtcgcgtcg
ctcctgcgaatggacaacgaggcgttcgtcaactgcgcgtacgtccagcagggcgaggtc
aacaagctcatcaacgccacgccttcccagcggcaggacatgatagacggtctgctgcaa
ctcggcaaactcgaaacctaccgcgaacgtgcaggcgacgcccggttgggagttcaggac
gtgctgacgagcaagcgcagtgtcctcgaagacgtcgagtcgcaaatcgagaccaaggag
gacgagaacctccacagcaggctcaacgcactcgaatcagaactctcagaggtcacgtcg
aaaatcgagcgctacgaagaccagcgcgacaaggcacggcagacactcgaagcggcccag
tccacactcgacgaacacgaggagaaacgcgagcgactggccgaggtcgaatctgccatc
gacgaactcaaagagaaaatcgcagacgacgagacgacgcgcgaccgactcacagagaga
atccgcgaactggacgagaacgtcgacgaactcgacgatagcatcgcggcagccgtctcg
aaaaccgacctcgacgaggccagcgacgacgcgctcgcagcagcgcgagagacgctcgac
gaccgtgaagccgagattcgcgaagaactgtcggatgcgcgcaccaaggcccaggcgctc
acgacgcaggccgaccgcctcaaagagcgggccgaggacctcgaatcgcgcgcgaaggag
aaacgcgagagcgccgacgaggacgaggcggccgcgggcgacgcggcggccgacctggac
gaacttcgcgagacgcgggctgatatcgagtcgtcgctggcgtccatcgacgaaaggttc
gaagacgcgcctgtcgaacgaggggaagcggccgacctcctcgccgagcgtcgagacacg
ctctcggagacccgcgagtcgctcgccgagacggagaccgaattgaagaacgcgcgcgag
cgactggcggaagcccgcgaactccgcgacgctggcaagtgtcccgagtgcgggcagccg
gtcgacgagtcgccacacgtcgatgccatcgccgaacgggaggcggcggtcgagtcactc
gaagcgaaatgcgagtcgctcgaatcgaaggtcgaatcctgccggtcggcagtcgaggcg
gccaaacaactggaagacgccgagagccgcgccgcatctctcgaagaccgtctctcgctc
gccgaagaacgaatcgtcgaccacgaggagacggtcgaatcacgccgcgacgcggccgaa
acgaagcgagaggaggcgacggaactcgaagccgacgccgaggagaaacgcgaggcggcc
gcgacgcaagccgaccgcgcggcgacggtcaaagagacggtcacagagctcgaatccgac
ctcgaagcactcagtgaccgccgtgacgacctcgaccgagtcgaatcgctgctcgacgac
cgcgaggcggcaatcgacgaccgggaccgactccgagagaagcgcgagacgctcgccgag
gtcaacgacgagcgccgtgaacatctgcaggaccgccgcgaccgccgtgccgaccttcgc
gaagcggtcgacgaagacgcggtcgaagacgcccgctcgcgcaagcagaaggccgaatcg
tacatcgagcaggtcgaatctgacgtgcttcccgacctgcgcgagaagcgcgacgacctc
cagagcaagattggcggggtgaaagccgacctcgaacgcctctcggaactccgagagcgt
cgcgaggaactcgccgagcgcgtcgacgccctccagtcgctccacgacgaggtgacggac
ctcgaatcgacttacggcgacctccgggcggaactccgccagcggaacgtcgagattctc
gaacggatgctcaacgagacgttcgacctcgtctacggcaacgacgcctactcgcgcatc
cgcctcgacggcgaatatgggcttacagtgttccagaaagacgggactgcgctccaaccc
gagcagctatcgggtggcgagcgagccctgtttaacttgagcctccggtgtgctatctac
cgacttctcgctgagggtatcgacggggctgcacccctcccaccgctcatcctcgacgaa
ccgaccgtcttcctcgacgacggtcacgtctcccgactcgtgaacctcgtcgaagagatg
caacgccgcggcgtcaagcagattctcatcgtcagccacgacgacgaactcgtcggcgcg
gcggacgacctcgtgcgcgtcgagaagaacccgacgaccaaccggtcgtcggtcgaacga
accgacgcgccggacctccagagcgcgctggcagacgactaa
DBGET
integrated database retrieval system
