Haloferax larsenii: KU306_09875
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Entry
KU306_09875 CDS
T08379
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hls
Haloferax larsenii
Pathway
hls03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KU306_09875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hls03021
]
KU306_09875
Transcription machinery [BR:
hls03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KU306_09875
Prokaryotic type
Archaeal type
TFB
KU306_09875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_LysW
Cyclin_N
Zn_ribbon_PaaD
Sigma70_r4
Ribosomal_S27e
Zn_ribbon_Brz
UMPH-1
Zn_ribbon_RRN7
HTH_Tnp_ISL3
A2L_zn_ribbon
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
UVE49234
LinkDB
All DBs
Position
complement(1906393..1907340)
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AA seq
315 aa
AA seq
DB search
MRNKNEAETEDTRDRTLECPECESETLVSDTEHGETVCDDCGLVVEENEIDHGPEWRAFN
STEKNQKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGRSLSSRQREKMQRLRTWNERFRTR
DSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALNDDLLPGRSIEGVATSSLYAA
ARMADTPRSLDEITSVSRVEKDEIARTYRYVVRELKLEIKPADPEQYVPRFASELGLSDE
PERRARQLLKNAKEQSVHSGKSPVGLAAAAVYAASLLTNEKVTQNEVSEVANISEVTIRN
RYHELLEAEEKAQVP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaacaagaacgaagccgaaaccgaagacacccgagaccgaaccctcgaatgccca
gagtgtgagtcagagaccctcgtatccgacacggagcacggcgagaccgtctgtgacgac
tgtggtctcgtcgtcgaagaaaacgagatagaccacggtcccgagtggcgagcgttcaac
tccacggagaaaaaccagaagtcccgcgtcggcgcgccgacgaccaacatgatgcacgac
aaggggctgtcgaccaacatcggctggcagaacaaggacgcctacggccggtcgctgtcc
tcgcgccaacgcgagaagatgcagcgccttcgcacgtggaacgagcgcttccgcacccgc
gactccaaggaacgcaacctcaagcaggcgctcggcgaaatcgaccgcatggcctccgcg
ctcggccttcccgagaacgtccgagagaccgcctcggtcatctaccgtcgcgccctcaac
gacgacctgctccccggccgctctatcgagggcgtcgcaacgtcctcactctacgcggcc
gctcgcatggccgacacgccgcgctcgctcgacgaaatcacgagcgtctcgcgcgtggaa
aaggacgaaatcgcccgaacctaccgctacgtggtacgcgagctcaagctcgaaatcaag
cccgccgaccccgagcagtacgtcccgcgattcgccagcgaactcggcctctccgacgag
ccggaacgccgcgcacgccaactcctgaagaacgccaaagaacagagcgtccactcgggc
aagtcgccggtcggcctcgccgccgccgccgtctacgccgcgtcgctcctcaccaacgag
aaagtgacccaaaacgaggtctccgaggtggccaacatctccgaagtgaccatccgcaac
cgctaccacgaactcctcgaagccgaagagaaggcgcaagtcccctaa
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