Haloferax larsenii: KU306_10410
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Entry
KU306_10410 CDS
T08379
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hls
Haloferax larsenii
Pathway
hls00100
Steroid biosynthesis
hls00909
Sesquiterpenoid and triterpenoid biosynthesis
hls01100
Metabolic pathways
hls01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
KU306_10410
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
KU306_10410
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hls01006
]
KU306_10410
Enzymes [BR:
hls01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
KU306_10410
Prenyltransferases [BR:
hls01006
]
Terpene biosynthesis
Squalene/phytoene synthase
KU306_10410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UVE49337
UniProt:
A0ABY5RCJ7
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All DBs
Position
complement(2009091..2010167)
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AA seq
358 aa
AA seq
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MSRHADARPPATDDDLNWCHDAVQGVSRTFALTVDVLDEPMSSYICIGYLLCRIPDTIED
SSSIAPDEQAHLLRLYDSALDPDDDTSIDEFVVAVEPHLPPAADRSDDWDVVANAPRVLR
TFEALPVDVREAVTPPVRELVSGMAMFVERYSHTGGLRIQSREELEEYCYYAAGTVGNLI
TNLVTRGNIDRERHSLLYDTAEEFGLLLQLVNIAKDVHDDYDSENNVYLPAEWLEDAGVP
QEEVTAPQHEAQTASVVRRTATHAKSFLDDAQTYLETVPLRDGNTLAAWGIPFLLAVGTL
RELVANPERAVTGEGVKISRQEVFAVVAALNGTSADTLAEMREVISQQPFHRATTNID
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacgccgatgcccggccaccggcaaccgatgacgacctcaattggtgtcac
gatgcagtccagggcgtctcacgaaccttcgccctcaccgtggacgttctcgacgaaccg
atgtcctcgtacatctgtatcggatatctactctgtcgaatccccgacactatcgaggac
tcgtcgtcgattgcgccggacgagcaggcacacctcctcagactctacgacagcgcgctc
gaccccgacgacgacacctctatcgacgagttcgtcgtcgccgtcgagccgcacctcccg
cccgcagccgaccgttctgacgactgggacgtcgtcgccaacgcgccgcgcgtgctccgc
acgttcgaggcgcttccggtcgacgttcgcgaggcggtgacgccgcccgttcgcgaactc
gtctccggtatggcgatgttcgtcgagcggtactcacacaccggtggactccgcattcag
tcgcgcgaggaactcgaagagtactgttactacgccgcggggaccgtcggcaacctcatc
acgaatctcgtgacgcgcgggaacatcgaccgcgaacgccactcgcttctgtacgacacc
gccgaggagttcggcttgctcctccaactcgtcaacatcgcgaaggacgttcacgacgac
tacgactccgagaacaacgtctacctgccggcagagtggctcgaagacgctggcgtcccc
caagaggaagtcactgcgccccagcacgaagcgcaaaccgcgtcggtcgtccgccggact
gccacccacgccaagtcgttcctcgacgacgcgcagacctatctggagacggttccgctc
cgcgacggcaacacgctcgccgcgtggggcatcccgttcctgctcgccgtcggcacgctc
cgcgaactcgtcgccaaccccgagcgagcggtgaccggagagggagtcaagatttcgcgc
caagaggtgttcgccgtcgtcgccgcgttgaacggcacgagcgctgatacactcgccgag
atgcgcgaagtcatctcccaacagccgttccaccgcgcaacgaccaacatcgactga
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