Haloferax larsenii: KU306_12450
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Entry
KU306_12450 CDS
T08379
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hls
Haloferax larsenii
Pathway
hls03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KU306_12450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hls03021
]
KU306_12450
Transcription machinery [BR:
hls03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KU306_12450
Prokaryotic type
Archaeal type
TFB
KU306_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_LysW
DUF8106
A2L_zn_ribbon
Ribosomal_S27e
Zn_ribbon_PaaD
Zn_Ribbon_YjdM
Lar_restr_allev
Sigma70_r4
Zn_ribbon_8
Zn_ribbon_RRN7
Cyclin_C
Zn_ribbon_Elf1
Zn_ribbon_Brz
Zn_ribbon_tTFIIB
DUF5817
Motif
Other DBs
NCBI-ProteinID:
UVE49715
UniProt:
A0A1H7JFM3
LinkDB
All DBs
Position
2391891..2392841
Genome browser
AA seq
316 aa
AA seq
DB search
MERPSRQRQREEATAQEDEQLSCPECGSDQVVTDADQGELVCDDCGLVLDERQIDRGPEW
RAFNHSERQSKSRVGAPITETMHDRGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQER
IRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVATSA
LYAACRQEGIPRSLDEVAEVSRVPQKEIGRTYRYISQELGLELKPVDPKQFVPRFASALN
LSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVTEV
TIRNRYQEQIEAMGFR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagccggcagcgtcaacgtgaggaggcaacggcacaggaggacgagcaa
ctaagttgcccggagtgtgggtccgaccaggtcgtcaccgatgcagaccagggggaactg
gtgtgtgacgactgtggtctcgttctcgacgagcgtcaaatcgaccgtggtccagagtgg
cgtgcgttcaatcactcggaacgccaatcgaagtctcgtgtcggtgcgccgattaccgag
acgatgcacgaccgcgggctgacgacgaccatcgactggaaggacaaagacgcatacgga
cggtcgctctcctcggagaagcggtcgcagatgcaccgcctgcgaaagtggcaggaacga
attcgaaccaaagacgctggtgaacgaaacctgcagttcgcactcagcgaaatcgaccgc
atggcgtcggcactcggcgttccgcggtcggtccgtgaggtcgcgtcggtcatctatcgc
cgcgcgctcaacgaagacctgattcgcgggcgctccatcgagggcgtcgccacgtcggcg
ctctacgccgcctgccgtcaggaaggtatcccgcgctcgctcgacgaagtcgcggaggta
tctcgcgttccgcagaaggagattggacgaacataccgatacatctcgcaggaactcggg
ttggaactcaaacccgtcgaccccaaacagttcgtccctcgttttgcatccgcgctcaat
ttgtccgaagaagttcagtccaaggccaccgaaatcatcgacgtctccgcagagcagggc
ctgctctcgggcaagtcgccgaccggattcgccgccgcagccatctacgcggcatcgctt
ctctgcaacgagaagaagacccagcgcgaagtcgccgacgtcgcgcaggtgaccgaagtc
accatccggaaccggtaccaggaacaaatcgaagcgatgggcttccgctaa
DBGET
integrated database retrieval system
