Haloferax larsenii: KU306_13485
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Entry
KU306_13485 CDS
T08379
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hls
Haloferax larsenii
Pathway
hls03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KU306_13485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hls03021
]
KU306_13485
Transcription machinery [BR:
hls03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KU306_13485
Prokaryotic type
Archaeal type
TFB
KU306_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Zn_ribbon_RRN7
Auto_anti-p27
Cyclin_N
Zn_ribbon_tTFIIB
DZR
Trm112p
COX5A
A2L_zn_ribbon
DZR_2
HTH_Tnp_ISL3
DUF1272
Zn_ribbon_8
Zn_ribbon_Top1
BRF2-like_C_cyclin_rpt
DUF5795
Ribosomal_S27
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
UVE49916
UniProt:
A0ABY5RC25
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All DBs
Position
2601859..2602857
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AA seq
332 aa
AA seq
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MTDTTTTRTYSKDATARDVIESERDESQRVDDEEQICPECGGNLVQDNERGETVCGECGL
VVEDTVVDRGPEWRAFDAAERDSKSRVGAPTTKMMHDKGLSTNIGWQNKDAYGKSLSPRQ
REQMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALNDDL
LPGRSIEGVATASLYAAARMADTPRSLDELEKVSRVEKMELTRTYRYIVRELKLEIKPAD
PEQYVPRFASELGLSDEAERQARELLRGAKETGVHSGKSPVGLAAAAVYAAALLTNEKVT
QSEVSAVADISEVTIRNRYKELLEVQDSNMLA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaccaccacccgaacgtacagcaaagacgcgacggctcgagacgtaatc
gagtccgagcgagacgaatcgcagcgagtagacgacgaagaacaaatctgccccgaatgc
ggtggcaacctcgttcaggacaacgaacgcggcgagaccgtctgcggtgagtgcggactc
gtcgtcgaagacaccgtggtcgaccgcggccccgagtggcgcgcgttcgacgccgccgag
cgcgacagcaagtcccgcgtcggtgcgccgacgaccaagatgatgcacgacaaggggctg
tcgaccaacatcggctggcagaacaaggacgcatacggcaagtccctgtcaccgcggcag
cgcgagcagatgcaacgcctccgcacgtggaacgagcggttccgcacccgcgactccaag
gaacgcaacctcaagcaggcactcggcgaaatcgaccgcatggcctcggccctcggcctc
ccggagaacgtccgcgagaccgcctcggtcatctaccgccgcgccctcaacgacgacctg
ctccccggccgttccatcgagggtgtcgcgacggcgtctctctacgccgccgcccgcatg
gccgataccccccggtcgctcgacgaactggagaaggtctcccgagtcgagaagatggaa
ctcacgcggacgtaccgctacatcgtccgcgagctgaagctcgaaattaagcccgccgac
cccgagcagtacgtcccccgcttcgccagcgaactcggactctccgacgaagcggagcga
caggcgcgggagttgctccgcggggcgaaagaaaccggcgtccactccgggaagtccccg
gtcggactcgcagcggccgccgtctacgccgctgcgctcctcaccaacgagaaggtgact
caaagcgaggtctctgcggtcgcagacatctcagaggtgaccatccgcaaccgctacaag
gaactgctcgaagtgcaagacagcaacatgctcgcctaa
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