Haloferax larsenii: KU306_15085
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Entry
KU306_15085 CDS
T08379
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hls
Haloferax larsenii
Pathway
hls04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KU306_15085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hls03019
]
KU306_15085
03009 Ribosome biogenesis [BR:
hls03009
]
KU306_15085
04131 Membrane trafficking [BR:
hls04131
]
KU306_15085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hls04147
]
KU306_15085
Messenger RNA biogenesis [BR:
hls03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KU306_15085
Ribosome biogenesis [BR:
hls03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KU306_15085
Membrane trafficking [BR:
hls04131
]
SNARE
SNARE associated proteins
Others
KU306_15085
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KU306_15085
Exosome [BR:
hls04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KU306_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
NPHP3_N
nSTAND3
RNA_helicase
AAA_7
AAA_28
AAA_3
AAA_lid_PRS2_C
Mg_chelatase
IstB_IS21
ABC_tran
DUF815
NB-ARC
SLFN-g3_helicase
Sigma54_activat
AAA_24
Parvo_NS1
AAA_18
AAA_30
Zeta_toxin
AAA_17
AAA_11
AAA_19
TsaE
PhoH
bpMoxR
Bac_DnaA
Vps4_C
ATPase_2
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
UVE50207
LinkDB
All DBs
Position
2914015..2916273
Genome browser
AA seq
752 aa
AA seq
DB search
MKLIVKPLKQKDAGRGLAAIDRAAANKLDLEGGDFIRIEGPDGGTAIARVWPGYPEDQNT
GVIRIDGRLRQEAGVGIDDRVDVAKADVKPAQKVTIALPQNLRIGGNVGTYIRDKLSGQP
VTKGQNVQLPLGFGFMSASNQSVPIKIASTQPSGTVVVNDNTEFQVSQKPAEQIADTSSG
TSDGPSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLI
AKAVANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRG
EAGGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEIGVPDR
EGRKEILQVHTRNMPLTDEVDLDSYADNTHGFVGADLESLAKESAMHALRRIRPELDLEA
EEIDAEVLESLRVTEDDFKEALKSTEPSALREVFVEVPDVTWEDVGGLGDTKERLRETIQ
WPLEYPEVFEKMDMAAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGE
SEKGVREVFKKARENAPTVVFFDEIDSIAAERGSDSTSSGVTERVVSQLLTELDGLESLE
DVVVIATTNRPDLIDAALLRPGRLDRHVHVPVPDEDARRAILDVHTEHKPLADDVDLDKI
ASRTDGYVGADIEALCREASMNASREFITSVEKDEIDESIGNVRVTMDHFVDALDEVGPS
VTDEVRRRYDEIEERFHQSEVQHEDEAGRTFY
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatcgtcaaacccctgaagcagaaggacgccggtcgtggactcgctgctatc
gaccgggccgccgcgaataagctcgacctcgaaggcggagatttcatccgcatcgaaggc
cccgacggcggtaccgccatcgcgcgtgtctggccgggctaccccgaagaccagaacacg
ggcgtcatccgtatcgacggtcggctccggcaagaggccggcgtcggcatcgacgaccgc
gtcgacgtggcgaaagccgacgtcaagcccgcacagaaggtgacgattgcgctcccgcag
aacctccgtatcggcgggaacgtcggcacctacatccgcgacaaactctccggacagccc
gtcacgaagggccagaacgtccagcttccgctcggattcggcttcatgagcgcgtcgaac
cagtcggtgccaatcaaaatcgcctcgacgcaaccgtccggaacggtcgtcgtcaacgac
aacaccgagttccaagtcagccagaagccggccgagcaaatcgccgacacctcctccggt
acgagtgacggtccctccgtgacctacgaggacatcggcggtctcgacaaggagctcgaa
caggtccgcgagatgatcgaactgccgatgcgtcacccggaactgttcaagcgcctcggc
atcgaaccgccgaaaggcgtcctcctgcacggcccgccggggaccggaaagacgctcatc
gccaaggccgtcgccaacgaaatcgacgcctccttccacacgatttccggcccggaaatc
atgtcgaagtactacggcgagtccgaagagcaactccgtgaaatcttcgaggaggccacg
gagaactcgccggctatcgtcttcatcgacgaaatcgactccatcgcgcccaagcgcggc
gaggccggcggtgacgtcgaacgccgcgtcgtcgcacaactgctgtcgctgatggacggc
ctcgacgagcgcggcgaagtcgtcgtcatcggcgcgaccaaccgtgtcgacgccatcgac
accgcactccggcggggcggtcgcttcgaccgcgaaatcgaaatcggcgtcccggaccgc
gagggccgcaaggagattctgcaggtccacacgcggaacatgccgctgaccgacgaggtc
gacctcgactcctacgccgacaacacccacgggttcgtcggtgccgacctcgaatcgctg
gcgaaggagtcggcgatgcacgcgctgcgtcgcatccgcccggaactcgacctcgaagcc
gaggaaatcgacgccgaagtcctcgaaagtctgcgcgtcactgaagacgacttcaaggag
gcgctcaagagcaccgaaccctccgcgctccgcgaagtgttcgtcgaagtgccggacgtt
acctgggaggacgtcggcggcctcggagacaccaaagaacgcctccgtgagaccatccag
tggcccctcgaataccccgaggtcttcgagaagatggacatggccgccgccaaaggcgtc
ctgatgtacggcccaccggggacggggaagaccctcctcgccaaggccgtcgccaacgag
gcggagtcgaacttcatctctatcaagggccccgaactgctcaacaagttcgtcggcgag
tccgagaagggcgtccgcgaagtgttcaagaaagcccgcgaaaacgccccgactgtggtg
ttcttcgacgaaatcgactccatcgccgcagaacgcgggagcgactccacgagttccggc
gtcacagagcgcgtcgtctcgcaactcttgaccgagttggacggcctcgaatcgctcgaa
gacgtggtcgtcatcgcgaccacgaaccgcccggacctcatcgacgcggcgctcttgcgc
cccggtcgcctcgaccgccacgttcacgttcccgtgccggacgaggacgctcgccgcgcc
atcctcgacgtccacacggagcacaagccgctggccgacgacgtcgacctcgacaaaatc
gcgtcgagaaccgacggctacgtcggtgccgacatcgaagcgctctgccgcgaggcgtcg
atgaacgccagccgtgagttcatcacgagcgtagagaaagacgaaatcgacgagagcatc
ggcaacgtgcgcgtcacgatggaccacttcgtcgacgcgctcgacgaggtcggaccgagc
gtcaccgacgaggtccgccgccgctacgacgaaatcgaagagcgcttccaccagagcgaa
gtccaacacgaagacgaagcgggccggaccttctactag
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