Halosimplex litoreum: I7X12_01500
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Entry
I7X12_01500 CDS
T06959
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hlt
Halosimplex litoreum
Pathway
hlt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
I7X12_01500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlt03019
]
I7X12_01500
03009 Ribosome biogenesis [BR:
hlt03009
]
I7X12_01500
04131 Membrane trafficking [BR:
hlt04131
]
I7X12_01500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlt04147
]
I7X12_01500
Messenger RNA biogenesis [BR:
hlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
I7X12_01500
Ribosome biogenesis [BR:
hlt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
I7X12_01500
Membrane trafficking [BR:
hlt04131
]
SNARE
SNARE associated proteins
Others
I7X12_01500
Autophagy
Aggrephagy
Other aggrephagy associated proteins
I7X12_01500
Exosome [BR:
hlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I7X12_01500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
NPHP3_N
AAA_14
nSTAND3
RNA_helicase
IstB_IS21
AAA_28
Mg_chelatase
AAA_7
ABC_tran
AAA_18
AAA_3
ATPase
AAA_17
Sigma54_activat
NB-ARC
Parvo_NS1
DUF815
AAA_30
PhoH
AAA_24
TsaE
AAA_11
SLFN-g3_helicase
NACHT
AAA_lid_PRS2_C
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QPV63337
UniProt:
A0A7T3FZA5
LinkDB
All DBs
Position
301985..304210
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSEVTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVEIRKADAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVTLGRLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKREDFRGALNEVSPSAMREVLVELPKVSWDDVGGLEEAKGKVQESVEW
PLNKPQKFQRMGIDPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKAKQVAPTVIFFDELDSLAPGRGGDVGSNVSERVVNQLLTELDGLEDMEDV
MVIGATNRPDMIDPALIRSGRFDRLVMIGEPDVEGREQILRIHTEAQPLSPDVSLRELAE
ITDGYVGSDLESIGREAAIEALREDDDAEVVDMRHFRQALDNVRPTITDDIRDYYEQMEE
EFKSGGQSRQGPRSGGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtgcaactagaagtggcgaaagcgtacccgaacgactcggggcgcggcatc
gcccggctggatcccgacacgctcctccacctcaagctctctcccggcgacatcatcgag
atcgagggcagcgaggtgaccgcggcgaaggtctggcgcgcggaccgacaggactggaac
accgacaccgtgcgcatcgacggcttcacgcgtcagaacgccgacgtggggatcggcgaa
cgcgtcgagatccgcaaggccgacgccgagaaggccgacaagctcgtcctcgcaccgccc
gaggaggcgtccgtccagttcggctccgacgccgccggcatggtcaaacggcagatcttg
aagcggccggtcgtcgagcgcgacatcgtcccggtgatgtcctcgacgaaccatccgttc
atgcgctcgcccggccaggcgatcccgctgatcgccgtcgagaccgaacccgagggcgtc
tgtctcatcaccgaggacaccgaggtcgaactccgcgaggaacccatctccggcttcgag
aagaccggcggcgggatcacctacgaggacatcggcggcctccagaacgagatccagcgc
gtccgggagatggtcgagctcccgatgaaacacccccagatattcaagaagctcggcatc
gagccaccccagggggtcctgctgcacggcccgcccggcaccgggaagaccctgctcgcc
aaggccgtggccaacgagacctccgcgagtttcttctctatcgccggccccgagatcatc
tcgaagtactacggcgaatcggagcaacagctacgggagatcttcgaggacgccagcgag
gagtccccctctatcatcttcatcgacgagctggactccatcgctccgaagcgcgaggac
gtgaccggcgaggtcgaacgccgggtcgtcgcccagttgctgacgatgatggacggcctc
gaatcgcgcggccaggtcatcgtcatcgccgcgaccaaccgcgtcgacagcgtcgacccc
gcgctgcgccgcccgggtcggttcgaccgcgagatcgagatcggcgtccccgacgaggtc
ggccgcgaggagatcctccagatccacacccgcggcatgccgctgtcggacgacgtgacg
ctcggtcgcctcgccgacgagacccacggcttcgtcggcgccgacatcgagagtctgacg
aaggaggccgcgatgaaggcgctgcgtcggtacctcccggagatcgacttagacgaggag
gacatcccaccgagtctcatcgaccggatgatcatcaagcgcgaggacttccgcggcgcc
ctcaacgaggtgagtccgagcgcgatgcgggaggtcctcgtcgagctgccgaaggtctcc
tgggacgacgtgggcggcttagaggaagccaagggcaaggtccaggaatcggtcgagtgg
ccgctgaacaagccccagaagttccagcgaatgggcatcgatccgccgagcggcgtcctg
ctgtacggcccgccgggcaccgggaagacgctgatggccaaggccgtcgccaacgagacc
gacgccaacttcatctcggtgagagggccgcagctgctctcgaagtgggtcggcgagtcg
gagaaggccatccgccagacgttccggaaagcgaagcaggtcgccccgacggtgatcttc
ttcgacgagctggactcgctggcgcccggccgcggcggcgacgtgggcagtaacgtctcc
gagcgcgtcgtcaaccagctgctgacggaactggacgggctggaggacatggaggacgtg
atggtcatcggcgcgaccaaccgcccggacatgatcgaccccgcgctcatccgctcgggt
cggttcgaccggctcgtgatgatcggcgagcccgacgtcgagggtcgcgagcagatcctc
cgcatccacacggaggcccagccgctcagccccgacgtgagcctgcgcgaactcgccgag
atcaccgacggctacgtcggctccgacttggagtcgatcggccgcgaggccgccatcgag
gcgctccgcgaggacgacgacgccgaagtcgtcgacatgcgccacttccgccaggcgctg
gacaacgtccgccccacgatcaccgacgacatccgcgactactacgagcagatggaagag
gagttcaagagcggcggccagagccgacagggcccccgctcgggcggccggatcggcttc
cagtaa
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