Halosimplex litoreum: I7X12_03580
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Entry
I7X12_03580 CDS
T06959
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlt
Halosimplex litoreum
Pathway
hlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I7X12_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlt03021
]
I7X12_03580
Transcription machinery [BR:
hlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
I7X12_03580
Prokaryotic type
Archaeal type
TFB
I7X12_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Cas12f1-like_TNB
HTH_Tnp_ISL3
DUF7575
Zn_ribbon_tTFIIB
DUF7129
Anti-TRAP
Trm112p
Cyclin_N
DZR
HTH_24
Zn_ribbon_Nudix
A2L_zn_ribbon
TrmB
Auto_anti-p27
DZR_2
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QPV63724
UniProt:
A0A7T3FZQ2
LinkDB
All DBs
Position
complement(722071..723048)
Genome browser
AA seq
325 aa
AA seq
DB search
MSDTTIRTGAEEQTSERLREEEEAESTSEQECPECGGRLDADTEHGETVCAECGLVVEED
EIDRGPEWRAFNPSEKDEKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGNSLSSNQRQKMQ
RLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPKTVRETASVIYRRALEENLLPGRS
IEGVATASLYAAARQANTPRSLDEMTAVSRVDKMELTRTYRYVVRELNLEIKPADPESYL
PRFVSDLELSDDTERRARELIVSARDQGILSGKSPVGLAAAAVYAAALLTNEKVTQSEVS
EVANISEVTIRNRYKELLESVDAPA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgacaattcgaaccggcgccgaggaacagacgagcgaacggctgcgggag
gaggaggaggccgaatcgacgagcgagcaggagtgccccgagtgcggcggtcggctcgac
gccgacaccgaacacggcgagaccgtgtgtgcggagtgcggactggtcgtcgaggaagac
gagatcgaccgcggccccgagtggcgagcgttcaacccctccgagaaggacgagaagtcc
cgcgtcggcgcgccgacgacgaacatgatgcacgacaagggcctctcgaccaacatcggc
tggcagaacaaggacgcctacggcaactcgctgtcctcgaaccagcgccagaagatgcag
cgcctgcgcacctggaacgagcgcttccgcacccgcgactccaaagagcgcaacctcaag
caagcgctgggcgagatcgaccggatggcgagcgcgctcgggctcccgaagaccgtgcgc
gagacggccagtgtcatctaccgccgcgcgctggaggagaacctcctgcccggccgctcc
atcgagggcgtcgcgacggcgtcgctgtacgccgccgcccggcaggccaacaccccgcgt
agcctcgacgagatgaccgccgtctcccgcgtcgacaagatggagctcacgcggacctac
cgctacgtcgtccgcgagctgaacctggagatcaagcccgcggaccccgagagctacctc
ccgcggttcgtctcggacctcgaactcagcgacgacaccgagcgccgggcccgcgaactc
atcgtgagcgcgcgcgaccagggcatcctcagcgggaagtcccccgtcggcctcgccgcc
gccgcggtgtacgccgccgccctgctgaccaacgagaaggtcacccagagcgaggtcagc
gaggtagccaacatctccgaggtcaccatccgcaaccgctacaaggaactcctcgaatcc
gtcgacgcaccggcctga
DBGET
integrated database retrieval system
