Halosimplex litoreum: I7X12_05010
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Entry
I7X12_05010 CDS
T06959
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hlt
Halosimplex litoreum
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlt03016
]
I7X12_05010 (truD)
Enzymes [BR:
hlt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
I7X12_05010 (truD)
Transfer RNA biogenesis [BR:
hlt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I7X12_05010 (truD)
Prokaryotic type
I7X12_05010 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QPV63992
UniProt:
A0A7T3G0E7
LinkDB
All DBs
Position
complement(1015833..1017266)
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AA seq
477 aa
AA seq
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MREAHPVERAVGMDYYVSDAPGVGGHLRESPEDFRVTEVEAFDPDPLDADPGAYPNVLAR
VTLRSWDTNDFASELSDRLGISRERVSWAGTKDKHAVTTQLFSVEKADPEELRAVEIRDA
DIELLGRTGRPVLFGDLAGNAFGITVRGVEADAAEHADATTADLRAFANGDDATESEESD
ATTTADDPVTVGVPNFFGQQRFGSKRPVTHEVGLEILRGNWKGAVLAYVGNPAEREPEST
REARAYVDETEDWAGALDRLPKRLGFERSMCHRLVERQAERGGGGERSDVDLGDEDYRAA
LEAVPSNLQRLFVNAAQSFAFNRMLSERLERGLPFHEPVAGDVVCFADSEAPEGVALPDT
DRTQRVTEDRVSTVRRHCERGRAFVTAPLVGTETELADGEMGEIERAVLDALDLEPADFE
LPGEFESTGTRRAILVRTDLAVARGDDDALGFEFTLPKGSYATVVLREYLKCDPDAL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacaccccgtcgagcgggcggtcgggatggactactacgtcagcgacgcg
cccggcgtgggcggccacctccgcgagtcgcccgaggacttccgagtcaccgaggtcgag
gcgttcgaccccgacccgctcgacgccgacccgggcgcctacccgaacgtgctcgcgcgg
gtcacgctgcggagctgggacaccaacgacttcgcctcggaactctcagaccgcctcggt
atctcccgcgaacgggtctcctgggcgggaacgaaggacaaacacgccgtcacgacgcag
ctgttctccgtcgagaaggccgaccccgaggagctgcgagcggtcgagatccgcgacgca
gatatcgaactgctcggccggaccggtcgccccgtcctgttcggtgacttggcgggcaac
gccttcgggatcaccgttcggggagtcgaagccgacgccgccgagcacgcagacgcgacc
accgcggacctgcgggcgttcgcgaacggcgacgacgcgacggaatccgaggagtcggac
gccacgaccacggccgacgaccccgtgaccgtcggcgtccccaacttcttcggccagcag
cgcttcggcagcaagcgcccggtcacccacgaggtcggcctcgaaatcctccgcggaaac
tggaagggcgcggtgctggcctacgtcggcaaccccgccgagcgcgagcccgagtcgacg
cgtgaggcccgggcgtacgtcgacgagaccgaagactgggcaggggcgctcgataggctg
ccgaagcgactgggtttcgagcggtcgatgtgtcatcggctcgtcgagcgccaggcggag
cgagggggcgggggcgagcgcagtgacgttgacctcggcgacgaggactaccgcgcagcg
ctcgaagcggtcccttccaatctccagcggctgttcgtcaacgccgctcagtcgttcgcg
ttcaaccggatgctctccgagcgcctggagcgggggctcccgttccacgagcccgtcgcc
ggcgacgtggtgtgtttcgccgattcggaggcgcccgagggcgtcgcgctgccggacacc
gaccgcacccagcgcgtgacagaggaccgggtctcgacggtccgccgccactgcgaacgg
ggccgggcgttcgtcaccgcgccgctggtcggcaccgagacggaactggccgacggcgag
atgggcgagatcgagcgcgccgtgctggacgccctggatctggagcccgcggacttcgag
ctccccggcgagttcgagtcgaccgggacccgacgggcgatcctcgtgcggacggatctg
gccgtggctcggggcgacgacgacgcgctcggcttcgagttcacgctgcccaagggcagt
tacgccacggtcgtgttgcgcgagtacctgaagtgcgaccccgacgccctctga
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