Halosimplex litoreum: I7X12_08970
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Entry
I7X12_08970 CDS
T06959
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hlt
Halosimplex litoreum
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlt03016
]
I7X12_08970 (endA)
Enzymes [BR:
hlt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
I7X12_08970 (endA)
Transfer RNA biogenesis [BR:
hlt03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
I7X12_08970 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QPV64714
UniProt:
A0A7U3WAR9
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All DBs
Position
1802302..1803381
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AA seq
359 aa
AA seq
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MHATLSGDVVRAGERARERFYDSSGYGHPVDAGALELAPVEAAHLLYRGDLDSVEGPDGT
AMDFRAFLESAAVSEIAFLVYKDLRDRGFYLSPARAGWSDSSAARAAVDDPAVDFVVYPR
GSGPWDDEVAYRVGVVSEREAVPAGDLGDLVLAVVDEESALTYLATEHREVSGTSEAELP
TGVSGELLSDRLLLWDPPAAVYDRGFYGQPLDDRDGDVIQLSLLEAAFLARDGVLDVDGG
AEAVVERGREVEGERFDRRLRVYADLRERGLVPKTGYKFGADFRTYADVESVDDLGHSEL
LIRVLDGGHTFSPRDLALDVRLAHGVRKEMVFALVDGDINSGGPDDDGIEWLSVTRLTP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgacgctctcgggggacgtggttcgagcgggcgagcgggcccgcgagcgcttc
tacgactccagcggctacggccaccccgtcgacgccggcgcgctcgaactcgcgcccgtc
gaggcggcccacctgctctaccgcggcgacctcgattccgtcgaggggccggacggcacc
gcgatggacttccgtgcgttcctcgaatccgccgcggtctcggagatcgccttcctcgtc
tacaaggacctgcgcgaccgcgggttctacctctcgcccgcacgcgcgggctggtcggac
tcgtcggccgcccgggcggcggtcgacgaccccgcggtcgacttcgtggtctacccccgg
ggctcgggcccgtgggacgacgaggtagcgtatcgcgtcggcgtcgtcagcgagcgggag
gccgttcccgcgggggatctgggcgatctggtgctggccgtcgtcgacgaggagagcgcg
ctcacctacctggcgaccgagcaccgcgaggtctcggggacgagcgaagcggagctaccg
accggggtttcgggggagctactctcggaccgactgttgctctgggacccgccggcagcc
gtctacgaccgggggttctacggccagcccctcgacgaccgcgacggcgacgtgatccag
ctgtcgctgctcgaagccgcgttcctggctcgcgacggcgtgctcgacgtggacggcggg
gccgaggccgtcgtcgagcgcggtcgcgaggtcgagggcgagcgcttcgaccgccggctc
cgcgtgtacgcggatctgcgcgagcgcggcctggtgcccaagaccggctacaagttcggc
gccgacttccggacctacgccgacgtggagtcggtcgacgatctgggccattcggagttg
ctgatccgggtgctcgacggtggacatacgttctcgccgcgggatctggcgctggacgtg
cggctcgcgcacggggttcgcaaggagatggtgttcgcgctcgttgatggggatatcaat
agcggggggccggacgacgacgggatcgagtggctgtccgtgacgcgactgacgccgtag
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