Halosimplex litoreum: I7X12_11700
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Entry
I7X12_11700 CDS
T06959
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hlt
Halosimplex litoreum
Pathway
hlt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
I7X12_11700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlt03021
]
I7X12_11700
03019 Messenger RNA biogenesis [BR:
hlt03019
]
I7X12_11700
Transcription machinery [BR:
hlt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
I7X12_11700
RNA polymerase I system
I7X12_11700
Messenger RNA biogenesis [BR:
hlt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
I7X12_11700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
Ribosomal_uL24m-like
DUF6093
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
QPV61431
UniProt:
A0A7T3FVJ5
LinkDB
All DBs
Position
complement(2351259..2351696)
Genome browser
AA seq
145 aa
AA seq
DB search
MGIFAVKTTASQERTVADMIMNREEESIHAALAPDSLTSYVMVEADESAVFERISDEIPH
MRGVVPGKSGIAEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcttcgccgtcaagaccacggccagccaggagcgcaccgtcgccgatatgatc
atgaaccgcgaggaggagtcgatccacgccgcgctcgcgccggactcgctgacctcctac
gtcatggtcgaggccgacgagtccgcggtcttcgagcgcatctccgacgagattccgcac
atgcgcggcgtcgtccccggcaagtccggcatcgccgaggtcgaacacttcctctcgccc
aagcccgacgtcgagggtatcgccgagggggacatcgtcgagctcatcgccggcccgttc
aagggcgagaaggcccaggtacagcgcatcgacgagggcaaagaccaggtcaccgtcgaa
ctgtacgaggcgaccgtcccgatccccgtgacggtccgcggcgaccagatccgcgttctc
gactccgaggagcggtag
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integrated database retrieval system
