Halosimplex litoreum: I7X12_12555
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Entry
I7X12_12555 CDS
T06959
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hlt
Halosimplex litoreum
Pathway
hlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I7X12_12555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlt03021
]
I7X12_12555
Transcription machinery [BR:
hlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
I7X12_12555
Prokaryotic type
Archaeal type
TFB
I7X12_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF1192
Zn_ribbon_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QPV61590
UniProt:
A0A7T3KUC0
LinkDB
All DBs
Position
complement(2539044..2539982)
Genome browser
AA seq
312 aa
AA seq
DB search
MATTEHFERTFDEESGRTIQTTECPECDGRLITDGGETRCTDCGLVVEGCRVDRRGPRTF
ADDDTNRERTGAPITEARHDRGLSTEIGYKFDGNGNALSGQKRRQLTRLRREHTRAKWRS
KAERNLSHGCGEIARMVGALDLERAHREQASALFRSAQDEGLLPGRSIEAFATASVYAVC
RCTGATRTRGEVASVAQVGRERVITAYDVLNEQLNLPTPPQRPREYIPALASAMDVPSET
EGDARSLAERAWDAGESIGVHPSGFAAACLEVACRDDDVEIMQIALAEAADVTPVTVRAH
RDRIEEARSGWC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctacgacagaacacttcgagcgaacgttcgacgaagagagcggccgaacgatccag
acgaccgagtgtcccgagtgtgatggacggctcatcactgacggtggggaaacccggtgt
accgactgcggactcgtcgtcgagggctgccgtgtcgaccgacgcggcccacgcaccttc
gccgatgacgacaccaaccgagaacgcaccggggcgccgatcaccgaagcacggcacgac
cgcgggctgtcgacggagatcggatacaagttcgatgggaacggcaacgcgctctccgga
cagaaacgacgccagctcacccgcttgcgtcgcgagcatacccgggcgaagtggcggtcg
aaagccgaacggaatctctcccacggatgtggggagatcgcgcggatggtcggcgcgctc
gacctcgaacgtgcccaccgcgagcaggcgagtgcgctgttccggtcggcccaggacgaa
ggcctcctccccggtcggtcgatcgaggcgttcgcgacagcctcggtttacgcggtctgt
cgatgtacgggtgcaactcgaacgcgcggtgaggtggcgtcggtcgcccaggtcggccgt
gagcgggtgatcaccgcctacgacgtgctcaacgagcaattgaacctgccgacacctcca
cagcgtccgcgggagtatattccagcgctcgcgtcggcgatggacgttccatcggaaact
gagggggatgcacgttcactcgccgaacgtgcgtgggacgctggcgagagcatcggtgtc
catccttcggggttcgccgcggcctgtctcgaagtcgcctgtcgggacgacgatgtggaa
atcatgcagatagccctcgccgaagccgcggacgtgacgccggtgaccgtgcgtgcccat
cgcgatcggatcgaggaagcacgcagtgggtggtgttga
DBGET
integrated database retrieval system
