Halosimplex litoreum: I7X12_12825
Help
Entry
I7X12_12825 CDS
T06959
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hlt
Halosimplex litoreum
Pathway
hlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I7X12_12825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlt03021
]
I7X12_12825
Transcription machinery [BR:
hlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
I7X12_12825
Prokaryotic type
Archaeal type
TFB
I7X12_12825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DUF7558
Trm112p
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QPV61636
UniProt:
A0A7T3FVR1
LinkDB
All DBs
Position
complement(2609570..2610538)
Genome browser
AA seq
322 aa
AA seq
DB search
MTRTRFESDPERTRRSEARDESTAEASCPECDGQVTHDEASGETTCDACGLVVETDEIDR
GPEWRDFGGDDREKKSRVGAPMTELMHDKGLSTNIGWQNKDAYGSPLSQRQRTRMERLRT
WNERFRTKDAQERNLKQAFGEIDRMASALNLAESVSETAGVLYRRAVEDELLPGRSIEGM
ATAALYASVRQHGAPRRVTEFADVSRVSQRRIERAYRYLKAELGLAIEPEDPAQYVPQFA
SALDLSDEAERRATELLAVAKRANRHSGKSPSGLAAAAVYAAATLTNESLTQAAVSDVAD
VSRVTIRDRYQELLDVYADHDG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacacggacgagattcgagtccgaccccgaacgaacgcgccgctctgaggcgcgcgac
gagtcgaccgccgaagcgtcgtgtccggagtgcgacgggcaggtcacacacgacgaggcc
agcggcgagacgacctgtgacgcgtgtggactcgtcgtcgagaccgacgagatcgaccgc
ggtcccgagtggcgcgacttcggcggcgacgaccgagagaaaaagagccgggtcggcgcc
ccgatgaccgagctcatgcacgacaaggggctcagcacgaacatcggctggcaaaacaag
gacgcttacgggtcgcccctctcgcagcgacaacggacgcggatggagcggttgcgcacc
tggaacgagcggttccggacgaaagacgcccaggagcgcaacctcaaacaggcgttcggc
gagatcgaccgcatggcttcggcgctcaacctcgccgagtcggtcagcgaaaccgccggc
gtcctctatcggcgagccgtcgaagacgaactgctccccgggcgctcgatcgaagggatg
gcgacggcggcgctgtacgcgtccgtccgccagcacggcgcgccccggcgggtgaccgag
ttcgccgacgtgagccgcgtctcccagcggcgtatcgagcgagcgtaccgctatctcaag
gccgaactcggactcgctatcgagccggaggacccggcccagtacgtcccgcagttcgcg
tccgccctcgacctcagcgacgaggccgaacggcgagccaccgaactgctcgcggtcgcg
aaacgagccaaccgacacagcggcaagagcccgtccgggctggcggccgccgccgtctac
gccgcggcgacactgacgaacgaatcgctcacgcaggcggccgtgagcgacgtcgcggac
gtgagcagggtgacgatccgcgaccgctaccaggagttgctcgacgtgtacgccgaccac
gacgggtga
DBGET
integrated database retrieval system
