Halosimplex litoreum: I7X12_13095
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Entry
I7X12_13095 CDS
T06959
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hlt
Halosimplex litoreum
Pathway
hlt03030
DNA replication
hlt03420
Nucleotide excision repair
hlt03430
Mismatch repair
hlt03440
Homologous recombination
hlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I7X12_13095
03420 Nucleotide excision repair
I7X12_13095
03430 Mismatch repair
I7X12_13095
03440 Homologous recombination
I7X12_13095
03460 Fanconi anemia pathway
I7X12_13095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlt03000
]
I7X12_13095
03032 DNA replication proteins [BR:
hlt03032
]
I7X12_13095
03400 DNA repair and recombination proteins [BR:
hlt03400
]
I7X12_13095
Transcription factors [BR:
hlt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
I7X12_13095
DNA replication proteins [BR:
hlt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
I7X12_13095
DNA repair and recombination proteins [BR:
hlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
I7X12_13095
MMR (mismatch excision repair)
I7X12_13095
DSBR (double strand breaks repair)
HR (homologous recombination)
I7X12_13095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
OB_Ssb-like
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QPV61686
UniProt:
A0A7T3FW03
LinkDB
All DBs
Position
complement(2661735..2663222)
Genome browser
AA seq
495 aa
AA seq
DB search
MGAIEEVYADLDTDVSEEEFREAVEEKVEQMGGLADEETAAMLLAHELNEGEVDTVADIE
PGMEEVKFLAKVVSIGELRTFERDGEDEDGRVANVEAADETGTVRLAFWDQQAESVVEGE
LEEGQVLRIAGRPKDGYNGLEVSVDKAEPDDDAEIDVELGDGSTVDALTMGQSDVNVRGI
VLETDSIRTFDRDDGSEGKVSNLLLGDETGRVRVTMWDDRADRATELEPGTAVEVVDGYV
REREGDLELHVGDHGAIDEIDETVEFTPEADAVGAVEMDEVVDLAGVVRSADPKRTFDRD
DGSEGQVRNIRVQDDTGDIRVALWGEKADKEIAPGDEVFVADAEIQDGWQDDLEASAGWQ
STVVVLDEDTGAGSAAPSPGGSGSGASGGSGGSSGSDAGLGAFTGDGDGADSGTSGDGGS
EGAASAGGGADGGAAAAAAEEVEFTGTVVQTGDPVILDDGQETMQVDTDAALTLGQEVTV
RGAMADDRLDADDVF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgatcgaggaggtctacgcggatctggatacggacgtctccgaggaggagttc
cgcgaggccgtcgaagagaaagtcgagcagatgggcgggctcgcggacgaggagacggcg
gcgatgctgctcgcccacgagctcaacgaaggggaagtcgacaccgtcgcggacatcgaa
ccgggcatggaggaggtgaagttcctcgcgaaggtggtctcgatcggtgagttgcgcacg
ttcgaacgcgacggcgaggacgaggacgggcgcgtcgccaacgtcgaagcggccgacgag
accggtaccgtccggctggccttctgggaccagcaggccgagtccgtggtcgagggcgaa
ctggaggaggggcaggtcctccggatcgccggccgcccgaaagacggttacaacggcctc
gaagtctccgtcgacaaggccgaaccggacgacgacgccgagatcgacgtggaactgggc
gacgggtcgaccgtcgacgcactgacgatgggccaatcggacgtgaacgtccgggggatc
gtcctggagacggactcgatccgcacgttcgaccgcgacgacgggtcggaggggaaggtg
tcgaacctgctactgggcgacgagaccggccgcgtgcgcgtgacgatgtgggacgaccgc
gccgaccgcgcgacggagctcgaacccggcacggccgtcgaggtggtcgacggctacgtc
cgcgagcgggagggcgatctggagctgcacgtcggcgaccacggggcgatcgacgagatc
gacgagaccgtcgagttcacgccggaggccgacgccgtcggcgccgtggagatggacgag
gtggtcgatctggccggcgtcgtccgttcggccgacccaaagcgtaccttcgaccgcgac
gacggctcggaggggcaggtccggaacatccgcgtgcaggacgacacgggcgacatccgg
gtggcgctgtggggcgagaaagccgacaaggagatcgcgccgggcgacgaggtgttcgtc
gccgacgccgagatccaggacggctggcaggacgacctcgaggcgtcggcgggctggcag
tcgacggtggtcgtcctcgacgaggacaccggtgcgggctcggccgcaccctcgccgggc
gggtccgggtcgggtgcgagcggcgggagtgggggttcgagcgggtcggacgccgggctc
ggcgcgttcaccggtgacggtgacggcgccgactccggcacgagcggcgacggcgggtcc
gagggggcggcgtcggccggtgggggcgccgacggtggggccgcggcggccgcggcggaa
gaggtggagttcacggggacggtcgttcagactggcgatccggtcatcctggacgacggt
caggagacgatgcaggtcgacaccgacgcggcgctgacgctcgggcaggaagtgaccgtc
cgcggcgcgatggccgacgaccgactcgacgccgacgacgtgttctga
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integrated database retrieval system
