Halosimplex litoreum: I7X12_17605
Help
Entry
I7X12_17605 CDS
T06959
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hlt
Halosimplex litoreum
Pathway
hlt00100
Steroid biosynthesis
hlt00909
Sesquiterpenoid and triterpenoid biosynthesis
hlt01100
Metabolic pathways
hlt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
I7X12_17605
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
I7X12_17605
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hlt01006
]
I7X12_17605
Enzymes [BR:
hlt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
I7X12_17605
Prenyltransferases [BR:
hlt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
I7X12_17605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Arg_decarbox_C
DUF7691
Motif
Other DBs
NCBI-ProteinID:
QPV62525
UniProt:
A0A7T3FXH7
LinkDB
All DBs
Position
complement(3541711..3542757)
Genome browser
AA seq
348 aa
AA seq
DB search
MSRNQTEQMFQDDLDYCYDAVQDVSRTFALTVAELDEPMSRDICVGYLLCRIADTVEDAG
HIPPAEQRTLLDLYNRVLDPEDDAVIAEFRAAIDEWIPESPNDDWEVVAQSPRVFRAFDG
LDDDSQSAIRPPVRELVSGMAMFVERYAEQGGLRLQTFGELEEYCWYAAGTVGTLVTGLL
SRNVDDSVSETLQNNARSFAMLLQLVNVSKDVATDFEEENNVYIPQELLDDQQLDTEDIR
DGDNGEEFVPVIRRVVDRAEGYLDGAQTWLEAMPEIRGNTLSAWAIPFLLAVGTLRELEE
RPEDVIEEGDVKVSRSEVTTLFAMFSGEDDPSVAELRSKIRQQPLDEY
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggaaccagaccgagcagatgtttcaggacgacctcgactactgttacgacgcc
gtccaggacgtatcgcgcacgttcgcgctgacggtcgcggagctcgacgagccgatgtcg
cgcgacatctgtgtcggctacctcctctgtcggatagcggacaccgtcgaggacgccggg
cacatcccgccggccgagcagcggaccctgctggacctgtacaaccgggtgctcgacccc
gaggacgacgcggtgatcgccgagttccgggccgccatcgacgagtggatccccgagagc
ccgaacgacgactgggaggtcgtcgcccagtcgccgcgcgtgttccgcgcgttcgacggg
ctcgacgacgactctcagtccgcgatccggccgccggtccgcgagctcgtcagcgggatg
gcgatgttcgtcgagcgctacgccgaacagggtgggctccgcctccagaccttcggcgaa
ctcgaggagtactgctggtacgccgccggcaccgtcgggacgctcgtgactgggctgctc
tcgcgcaacgtcgacgactccgtcagcgagacgctccagaacaacgcccgctcgttcgcc
atgctcctccagctggtcaacgtctccaaggacgtggccaccgacttcgaggaggagaac
aacgtctacatcccccaggagctgctcgacgaccagcaactggacaccgaggacatccgc
gacggtgacaacggcgaggagttcgtccccgtcatccgccgggtcgtcgaccgcgccgaa
ggctacctcgacggcgcccagacctggctcgaagccatgccggagatccgcggcaacacc
ctctcggcgtgggcgatccccttcctgttggccgtcggcacgctgcgcgaactcgaggag
cgccccgaggacgtgatcgaggagggggacgtgaaggtctcccgctcggaggtgacgacg
ctgttcgccatgttctccggcgaggacgacccctccgtcgccgaactgcgctcgaagata
cgccagcagccgctcgacgagtactga
DBGET
integrated database retrieval system
