Halosimplex litoreum: I7X12_17975
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Entry
I7X12_17975 CDS
T06959
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hlt
Halosimplex litoreum
Pathway
hlt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
I7X12_17975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlt03019
]
I7X12_17975
03009 Ribosome biogenesis [BR:
hlt03009
]
I7X12_17975
04131 Membrane trafficking [BR:
hlt04131
]
I7X12_17975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlt04147
]
I7X12_17975
Messenger RNA biogenesis [BR:
hlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
I7X12_17975
Ribosome biogenesis [BR:
hlt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
I7X12_17975
Membrane trafficking [BR:
hlt04131
]
SNARE
SNARE associated proteins
Others
I7X12_17975
Autophagy
Aggrephagy
Other aggrephagy associated proteins
I7X12_17975
Exosome [BR:
hlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I7X12_17975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_14
AAA_22
AAA_33
NPHP3_N
nSTAND3
RNA_helicase
Mg_chelatase
AAA_7
IstB_IS21
AAA_28
AAA_3
AAA_lid_PRS2_C
Parvo_NS1
ABC_tran
DUF815
AAA_18
ATPase
NACHT
AAA_11
Sigma54_activat
AAA_24
AAA_17
TsaE
NB-ARC
Zeta_toxin
PhoH
AAA_19
AAA_30
SLFN-g3_helicase
Vps4_C
Bac_DnaA
bpMoxR
ATPase_2
ATP-synt_ab
Zot
HJURP_C
ApoC-I
Motif
Other DBs
NCBI-ProteinID:
QPV62595
UniProt:
A0A7T3KV93
LinkDB
All DBs
Position
3617680..3619947
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AA seq
755 aa
AA seq
DB search
MRLSVKPLKQKDAGRGLAAIDRAAMAELDLENGDYIVIEGDGSRAVARVWPGYPEDEGRG
VIRIDGRLRQEADAGIDDNVDVEKADVNPAARVSVALPQNLRVRGNVGPMIRNNLSGQAV
TEGQTVPVSFGLGPLSSMSGQKIPLKIAGTEPSGTVVVTDSTEVDVAEKPAEQITGAAPG
AAEGGAPDITYEDIGGLDDELEQVREMIELPMRHPELFETLGIEPPKGVLLHGPPGTGKT
LMAKAVANEIDAYFTDISGPEIMSKYYGESEEQLREVFDEAEENSPAIVFIDEIDSIAPK
RGETQGDVERRVVAQLLSLMDGLESRGQVIVIGATNRVDAVDPALRRGGRFDREIEIGVP
DKNGRKEILQVHTRGMPLAEGIDLDQYAENTHGFVGADLESLTKESAMNALRRIRPELDL
ESDEIDAEVLEHLEVSENDFKQALKGIEPSALREVFVEVPDVTWDQVGGLEDTKERLRET
IQWPLDYPEVFEAMDMQAAKGVLMYGPPGTGKTLLAKAIANEAQSNFISIKGPELLNKFV
GESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGQSAGDSQVGERVVSQLLTELDGLEE
LEDVVVIATTNRPDLIDNALLRPGRLDRHVHVPVPDEEARRKIFEVHTRDKPLAEGVDLD
DLAARTDGYVGADIEAVTREASMAATREFLASVDPEDIGDSVGNVKVTMEHFEDALEEVS
PSVTEETRERYDEIEERFDTAEAETGDDELGRTFQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagactctctgtcaagccgctcaagcagaaggacgcggggcgcggactcgccgcgatc
gaccgcgcggcgatggccgagctcgacctggagaacggcgactacatcgtcatcgagggc
gacgggtcccgcgcggtcgcgcgggtctggccgggctaccccgaggacgagggtcgaggt
gtcatccggatcgacggtcggctccgccaagaggccgacgcggggatcgacgacaacgtc
gacgtcgagaaggccgacgtgaacccggcggcccgggtcagcgtcgctctcccacagaac
ctccgggtcaggggcaacgtcggcccgatgatccgcaacaacctcagcgggcaggccgtc
accgagggccagaccgtgcccgtcagcttcgggctcggtccgctctcgtcgatgagcggc
cagaagatcccgctgaagatcgccggcaccgaaccgtcgggcaccgtcgtcgtgacggac
tcgacggaggtcgacgtggccgagaagcccgccgagcagatcaccggcgccgcgcccggc
gccgccgaaggcggcgcgcccgacatcacctacgaggacatcggcggcctggacgacgag
ctcgaacaggtccgcgagatgatcgagttgccgatgcgccaccccgagctgttcgagacg
ctcggtatcgagccgccgaagggcgtgctcctccacggcccgcccggcaccggcaagacg
ctcatggcgaaagcggtcgccaacgagatcgacgcgtacttcacggacatctccggcccg
gagatcatgtcgaagtactacggggagtccgaagaacagctccgcgaggtcttcgacgag
gccgaggagaactctcccgccatcgtcttcatcgacgagatcgactccatcgcgcccaag
cgcggtgagacccagggtgacgtcgaacggcgcgtcgtcgcgcaactgctgagcctgatg
gacggtctcgaatcgcgcgggcaggtcatcgtcatcggcgcgaccaaccgcgtcgacgcc
gtcgaccccgcgctccgtcgcggcggtcgcttcgatcgggagatcgagatcggcgttccc
gacaagaacggccgcaaggagatcctgcaggtccacacccgcgggatgcccctcgcggag
ggcatcgacctcgaccagtacgccgagaacactcacggcttcgtcggcgctgacctggag
tcgctgaccaaggagtcggcgatgaacgccctgcggcgcatccgccccgagctcgacctc
gaatcggacgagatcgacgccgaggtgctcgaacacctggaagtctcggagaacgacttc
aagcaggcgctgaaggggatcgaaccctcggcgctgcgggaggtgttcgtcgaggtgccg
gacgtgacctgggaccaggtcggcgggctcgaagacaccaaagaacggttacgcgagacg
atccagtggccgctggactaccccgaggtgttcgaggctatggacatgcaggccgccaag
ggcgtgctgatgtacggcccgccgggcacggggaagaccctgctcgccaaggccatcgcc
aacgaggcccagtcgaacttcatctcgatcaagggtcccgaactgctgaacaagttcgtg
ggcgaatcggagaagggcgtccgcgaggtcttcgagaaggctcgctcgaacgcacccacg
gtggtgttcttcgacgagatcgactccatcgcgggcgaacgcggacagagcgccggcgac
tcgcaggtcggcgagcgcgtcgtctcccagctgctgaccgagctggacggcctggaggag
ctggaggacgtggtcgtcatcgcgaccacgaaccgtccggacctcatcgacaacgcgctg
ttgcggcccggtcgcctcgacaggcacgtccacgtgcccgtcccggacgaggaggctcgc
cggaagatcttcgaggtccacacccgcgacaagccgctcgccgagggcgtcgacctcgac
gacctggcggcacgcacggacggctacgtcggcgccgacatcgaagccgtgacccgcgag
gcgtcgatggccgcgacccgcgagttcctcgcgagcgtcgaccccgaggacatcggcgac
tccgtcggcaacgtgaaggtcacgatggagcacttcgaggacgccctggaggaggtctcc
cccagtgtcaccgaagagacccgcgagcgctacgacgagatcgaagaacggttcgacacc
gcagaggccgagaccggcgacgacgagctcggccgcaccttccagtag
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