Halosimplex litoreum: I7X12_18960
Help
Entry
I7X12_18960 CDS
T06959
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hlt
Halosimplex litoreum
Pathway
hlt03022
Basal transcription factors
hlt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I7X12_18960
09124 Replication and repair
03420 Nucleotide excision repair
I7X12_18960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlt03021
]
I7X12_18960
03400 DNA repair and recombination proteins [BR:
hlt03400
]
I7X12_18960
Enzymes [BR:
hlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I7X12_18960
Transcription machinery [BR:
hlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
I7X12_18960
DNA repair and recombination proteins [BR:
hlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
I7X12_18960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_22
AAA_33
AAA
HTH_IclR
AAA_11
AAA_30
AAA_5
DUF4283
Motif
Other DBs
NCBI-ProteinID:
QPV62778
UniProt:
A0A7T3FXY6
LinkDB
All DBs
Position
complement(3821163..3823067)
Genome browser
AA seq
634 aa
AA seq
DB search
MTDDQGEPSLDRFHEAVEAAGNPVVTTEEVARHADEPRAAVETWLATLERERAVVSRDVS
QDPTVWYPAEWTDYADRERFVVFPDRRQIVVDRPAQFTRAQLSQFARLVDTNGEGGYVYE
IDDSDVWQAPYEDLEGLLGTVRDVLPQRYPALEEWIGDQWKRAHQFTLKTHEDGYVVLEA
ATENLMGNVARQKLDDSHLRAPISDTESWVAEEATAEVKRVLYEAGYPVQDERDLDSGEP
LDLDLNLDLREYQHDWVARFMETKSGALVGPPGSGKTVAAMGIVERVGGETLILVPSREL
VRQWRDELLAHTTLDESQVGEYHGGTKDIRPVTIATYQTAGMGRHRHLFDSREWGLIVYD
EVQHVPSDVYRRSANLQTRHRLGLSASPVREDDLQEEIFTLIGPPIGTDWDALFDEGFVA
EPTVEIRYVPWTDDDHRNEYVGSEGHERRQIAASNPAKIGETRRILREHPEQKALVFVDY
LDQGRELSAAIDAPFISGDTPHHERARKFEQFRDGSLDTLVVSRVGDEGIDLPDASLAIV
ASGLGGSRRQGTQRAGRTMRPAGRALMYVLATQGAREEEFARRQMRYLAGKGVQVRERTV
EGPEEDPDEASESDEGADGGDEDDDEGEDDVGVA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacgaccagggggagccgtcgctggaccggttccacgaggcggtcgaggcggcg
ggcaacccggtggtgacgacggaggaggtggcgcgccacgccgacgaaccgcgcgcggcg
gtcgagacgtggctcgcgaccctcgaacgcgagcgggcggtcgtgagcagggacgtgtcc
caggacccgacggtgtggtacccggcggagtggaccgactacgccgaccgcgagcggttc
gtcgtcttccccgaccgacgccagatcgtcgtcgaccggcccgcgcagttcacgcgggcc
cagctctcgcagttcgcccggctcgtggatacgaacggggagggtggctacgtctacgag
atcgacgattcggacgtgtggcaggcgccctacgaggacctggagggattgctcgggacg
gtccgggacgtgctgccccagcgctaccccgctctggaggagtggatcggcgaccagtgg
aaacgcgcccaccagttcaccctgaagactcacgaggacggctacgtcgtcctcgaagcg
gcgacggagaatctgatgggcaacgtcgcgcgccagaagctcgacgattcccacctccgg
gcgcccatctccgacaccgagagctgggtcgccgaggaggccaccgccgaggtcaagcgg
gtcctctacgaggcgggctaccccgttcaggacgaacgggacctcgattcgggcgaaccg
ctggatctcgacctgaacctcgacctgcgggagtaccagcacgactgggtggcccggttc
atggagacgaaatcgggcgccctcgtcggcccgccgggcagcggcaagaccgtcgccgcg
atgggcatcgtcgagcgcgtcggcggtgagaccctgattctggtccccagccgcgaactc
gtccgccagtggcgcgacgaactgctcgcccacacgacgctcgacgagtcccaggtcggc
gagtaccacggcggcacgaaagacatcaggcccgtcacgatcgccacctaccaaaccgcc
gggatgggcagacatagacacctgttcgactcccgcgagtgggggctgatcgtctacgac
gaggtccagcacgtccccagcgacgtgtaccgccggagcgcgaacctccagacccgccat
cggctggggctgtcggcgagccccgtccgggaggacgacctgcaggaggagatcttcacg
ctgatcggtccgccgatcggtacggactgggacgcgctgttcgacgaggggttcgtcgcc
gagccgaccgtcgagatccgctacgtcccctggaccgacgacgaccaccgcaacgagtac
gtcggcagcgagggccacgaacgccgccagatcgccgcttcgaacccggcgaagatcggt
gagacccgccgcatactccgcgagcaccccgagcagaaggcgctcgtgttcgtcgactac
ctcgaccagggtcgggagctgtcggcggcgatcgacgccccgttcatcagcggcgacaca
ccacatcacgagcgcgcacggaagttcgaacagttccgcgacgggtcgctggacacgctg
gtggtctcccgcgtcggcgacgaaggtatcgatctgcccgacgcctcgctggctatcgtc
gcgtcgggcttgggcggctcccgacgacagggcacgcagcgcgccggccggacgatgcga
ccggccggccgcgcactgatgtacgtcctcgccacgcagggcgcacgcgaggaggagttc
gcccgccgacagatgcgctatctcgccggtaagggcgtccaggtccgcgaacggaccgtc
gaggggcccgaagaagaccccgacgaggcgtccgagtccgacgagggtgccgacggcggg
gacgaggacgacgacgagggcgaagacgacgtcggcgtcgcctga
DBGET
integrated database retrieval system
