Halobacterium litoreum: LT972_00805
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Entry
LT972_00805 CDS
T07867
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hlu
Halobacterium litoreum
Pathway
hlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LT972_00805 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlu03019
]
LT972_00805 (prf1)
03012 Translation factors [BR:
hlu03012
]
LT972_00805 (prf1)
Messenger RNA biogenesis [BR:
hlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LT972_00805 (prf1)
Translation factors [BR:
hlu03012
]
Eukaryotic type
Release factors
LT972_00805 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
RbpA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UHH13550
LinkDB
All DBs
Position
complement(148330..149580)
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AA seq
416 aa
AA seq
DB search
MSEQDEVPSEDRRKYEFQKVIEELKDYEGSGTQLVTIYIPPDKQVSDVVAHVTQEHSEAS
NIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVIFSGAVDSGGGRTDMVTEVLESPPQ
PIESFRYHCDSAFLTEPLEEMLGDKGLYGLIVLDRREANVGWLKGKRIEAVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEIAEMADDLFVAKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVSYTDESGLKELVDRAQDTLAEADLMDDKADMEEFFKELNGGDL
ATYGFEPTRKNLVMGSVETLLISEDLRKDVVTYECPNEHEERELISQRSDTPDHECSDCG
EDAEVVEREDAIDHLMDIADQRGTDTHFISTDFEKGEQLLTAFGGFAGLLRYGTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggacgaggtaccgtccgaggaccgacgcaagtacgagttccagaaagtc
atcgaggaactcaaagactacgaggggagtggcacgcaactcgtcaccatctacatcccc
ccggacaagcaggtctcggacgtcgtcgcccacgtcacccaggaacactccgaagcctcg
aacatcaagtccaagcagacgcggacgaacgtccaggacgccctcacgtccatcaaggac
cgcctccggtactacgacaccttcccgccggacaacgggatggtcatcttctccggcgcg
gtcgactccggcggcgggcgcaccgacatggtcaccgaagtcctcgaatcgccgccccag
cccatcgagtcgttccgctaccactgcgactccgcgttcctcacggaacccctcgaagag
atgctcggggacaagggcttgtatggcctcatcgtcctcgaccgccgcgaagccaacgtc
ggctggctgaagggcaaacgcatcgaggccgtcaagtccgcgtccagcctcgtccccggc
aaacagcggaaaggtggtcagtccgcacagcgattcgcccgcctccgcctcgaagccatc
gacaacttctaccaggaaatcgcggagatggcagacgacctcttcgtcgccaaacgccac
gaactcgacggcatcctcgtcggcggcccctcaccgaccaaagacgagttcctcgacggc
gactacctccaccacgaactccaagacaaagtcctcgggaagttcgacgtctcctacacc
gacgaatccggcctgaaagaactcgtcgaccgcgcacaggacacgctcgcggaagccgac
ctgatggacgacaaggcggacatggaggagttcttcaaggaactcaacggcggcgacctc
gccacctacgggttcgagccgacgcgcaagaacctcgtcatgggctccgtcgaaacgctg
ctcatctccgaggacctccggaaggacgtcgtcacctacgagtgccccaacgagcacgaa
gaacgcgaactcatctcccagcgcagcgacacccccgaccacgagtgtagcgactgcggc
gaggacgccgaagtcgtcgaacgcgaggacgccatcgaccacctcatggacatcgccgac
cagcgcggcaccgacacccacttcatctccaccgacttcgagaaaggcgaacaactgctg
acggcgttcggcggctttgcgggtctcctgcggtacggcacgggcgtctag
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integrated database retrieval system
