KEGG   Halobacterium litoreum: LT972_01220
Entry
LT972_01220       CDS       T07867                                 
Name
(GenBank) 30S ribosomal protein S27ae
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
hlu  Halobacterium litoreum
Pathway
hlu03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hlu00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    LT972_01220
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    LT972_01220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hlu03011]
    LT972_01220
   04121 Ubiquitin system [BR:hlu04121]
    LT972_01220
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hlu04147]
    LT972_01220
Ribosome [BR:hlu03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    LT972_01220
  Archaea
    LT972_01220
Ubiquitin system [BR:hlu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   LT972_01220
Exosome [BR:hlu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LT972_01220
  Exosomal proteins of colorectal cancer cells
   LT972_01220
SSDB
Motif
Pfam: Ribosomal_S27 FYVE Zn_Ribbon_TF Zn_ribbon_RPB9 Ribosomal_L37e Zn_ribbon_3 Cas12f1-like_TNB zf-C2H2_FBX41 DUF7575 DUF7479 HypA zf_UBZ DUF5817 zf-C2H2_ZN142
Other DBs
NCBI-ProteinID: UHH13631
LinkDB
Position
222696..222830
AA seq 44 aa
MPRGDYYEDDGSTEKEQCPRCGDTFLADHGDRQHCGKCGYTEWN
NT seq 135 nt   +upstreamnt  +downstreamnt
atgccccgaggcgactactacgaggacgacgggtccacggagaaagagcagtgtccgcgc
tgtggcgacacgttcctcgcggaccacggtgaccgccagcactgcgggaagtgcggctac
accgagtggaactga

DBGET integrated database retrieval system