Halobacterium litoreum: LT972_01630
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Entry
LT972_01630 CDS
T07867
Name
(GenBank) Ig-like domain-containing protein
Organism
hlu
Halobacterium litoreum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CopC
Big_5
Big_12
DUF3244
TbpB_B_D
Motif
Other DBs
NCBI-ProteinID:
UHH13709
LinkDB
All DBs
Position
295341..302312
Genome browser
AA seq
2323 aa
AA seq
DB search
MVLSVMVGSIAFAGSAAAASNAGPEEFSDLGTDAGTLAAGETAVVQTIEVNDTDADDGTG
DTNPVNVTKVNVSNAGGTTVSASNVSEVRILDASGNELASAAPSGALSTGQTFDITNVTI
PDNGSTTLQVEVTIAPDATEDGNTLELATKANWTEGPNSGQTAYVTDGVAETLDTVEPGL
SSASTADNDNDGSVDTITVMFSEDVQDSSVEASDFSLSDGSVDSVDTSPSDNSTVHLTVS
DVGDTAATPNVNLSAGSVTDVAGNAGPAAEEQVTATDNANPAVTDKNLNKTLVNDADAPA
TVEVNVTFSENVTAGTVQIVDSGLATSPLDVTGSVDNDTFSGTVTINDNNDDVEANLSVT
GFSGENGNTQEAYSQQALTIDTQEDISINSAETADLNDDGTVETINVTFSDAVDDSTVLT
AIENDDFNLKSATVEDLNGGEANDATVSLEVSGLGNTAATDELSLFSNSIEDTAGNPGPT
TGTFKPVSDGAKPVVTDVTLNVTELNESDVPADVEVNVSFSEKMGTDPSVTLVGLSQGDI
TASPASADDGDANLSATTVSQIADNDEDVSVYVNVSDGDDSSGNAVETWNQSDLTVDTLA
PSVTVNNSEAPEGEIVSGELDLSTFFDISEDDGGETTYLINTTAGGSNYSEVNEQFDTNS
IDDTAHLTVRAVDTDNVGNSDNATTADINVDNTAPQVTIQSPSETTARQSGGVLDVTVDV
TEQNLAADNATLVLSDGNKTIQYNASLSDGSNEVDLLLNTSENASDASAIEPNLSATNTT
FDTQTVYDLSVTVDDSTGKSTTATQTDALFLDDTAPANFSLVAPSEATEYDPTVEGEDEL
VVSYGYTEDNVDTVTVSLTNESGAVANVTVDESQYTDDGVIKSFELDLVDSFDTGSLADG
RYNVSVTVTDLAGNKLVDNTTNAPVAINAESPSDGTPSFQGTTPTATASIGEDPENVTVE
ATYNVSVPEVTDAGAIEDPQNSLENVDVTAPNATVVVDYYDASEGKYLTYTEEVAVDFSG
ENATANATITESVTVDISDVGPSLDDGDRVLKRTASLSGNVGVDVEASYGTASNTDAVDT
GTTTFVDNETVAPTLDSIEVDGDVSATSDELVLTFDRPVQATAAGITADDFAYINENGNV
DNYVTAVSGVGDGDTQVTVTLNGAVEAGDVGSDIVSIQPDVLENTESPNKNVSATSDTFA
ETTAPVLTDATVGDDASTVTVTFDEQVQAANGSDLTAANFSYSGSANVTSVSQTADDTVV
VTLDASVTSGEIGSAEIAVSDVYDRFGNSLTDSTAVTDGTKPSDLQIVQPTQQTTVKSDD
LLDVTYGYVENVPDNAETTEITLTDNDGTSYTFTVDDTQYVAGVNKTVTLDLGNKGTLED
GAYHVEITVTDADSNEDTVQTEDAVVVVNDEAPTVSDVSIASDTSDIASDSTLNVTYDYD
PAPNATSVTVWVVDSEDAGNFTSGDLANASYTTYEKSVDHGVVDDRKLSVDLGGEIADND
DYTVFVTATDADEMQSDAAQASSTLDVNAEKPSIESVEANAGSDTVTVQFTEAVVPGDDD
ANITRADFAYQNVNGAGASAIESVAVHDGDTVTLELDAEVTSGDLGSDHVNARGGQIVDT
DGDNARVVGTDAVALSDSTQPTVGSVDAGAINANNADSYDVTVDTGSEVTDVSVTVTGSN
GTSVSDSATAVTGEATLTVNASALEDGSVTVDVTVTDAAGNEASASRTVTKDTDAPTIES
ATTNAGTNTVTVTFSEDVTGVSASALGITSSSHEVIDVVDDGSSDATVLVVLNESVPAAA
INDSSVAQITAAGVTDVAGNPVASQQKLTDVDAPSVMSVTADRGDENVTITFSENVDAGE
EGALNASDFAYTDANDAGASGIESVTQTGPQTVVLTLNGSLTPSDMAEDTVGIEADSVFD
SVGHPVAAHSSSIGITSDVSVSTTEDSVTVTVVSPNNVSTAIDSPITVEKKYRELGSLEG
FELNERYTKTLKASDFEKVEAGVYEATVSVDEDGVYVASGTVDSMMMSAEGMVDAEAPHP
TDAVITDVTSEAQLDDTRDTTRVRVLFNEPIDASEILPSDVSIEGFDGEVVAVQPAGPLG
SVTVVVEGKVQTGAYPDVTIDGDSYTDLAGTAGEEGGDTVVHTDTLDLSKGQNFVSVPAA
SGELDLDELDTSEVDAIYAYDAASNEWEAYDPDAKENDFSALEGGEGYVFVMDEAATLEV
NVYNVAGAEAGAAAPAPNQQELTEGWNLVGQFQEYDQSVTTALSSLGNDSVYSVLSQDES
ADGIAYESYGAGDFETMERGEAYWLFVQDDEVYTESSGHTVAV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctccgtcatggtgggctccatcgcgttcgccgggagtgctgcagccgcctca
aacgccggacccgaggagttctccgatctggggacagatgcggggacgctcgcggccggt
gagacggcagtcgtacagacaatagaagtgaacgacaccgacgcggacgacggaaccggt
gacacgaacccggtcaacgtgaccaaggtcaacgtgtccaatgcaggtggcaccaccgtc
tccgcgtcgaacgtctccgaggtgcggattctcgacgcgagcggcaacgagctcgcgtcg
gccgccccgtccggagcgctgagtaccggacagactttcgacatcacgaacgtcactatc
ccggacaacgggagtacgacgctccaagtcgaagtgacgattgccccggacgccacggaa
gacggcaacacgctggaactggccacgaaggcgaactggacggagggaccgaactccggc
cagaccgcctacgtgactgacggtgtcgccgagacgctcgacaccgtcgagccgggtctc
agcagcgcgtcgacggctgacaacgacaacgacggctccgtcgacacgattaccgtcatg
ttcagcgaggacgtacaggactcgtccgtcgaggcttcggacttctcgctgagtgacggt
agcgtcgacagcgtcgacacgagcccgtccgacaacagcacagtccacctgacggtgagc
gatgtcggcgacacggcggcgacgccgaacgtcaacctctccgcaggtagcgtcaccgac
gtcgccggcaacgctggcccggcggctgaggagcaggtcactgcgactgacaacgcgaac
cctgccgtgacggacaagaacctgaacaagacgctcgtcaacgacgcggacgcacccgcc
acggtcgaggtcaacgtcacgttcagcgagaacgtcaccgctggtaccgtccagattgtc
gacagcggtctggccaccagtccgctcgacgtgactggctccgtcgacaacgacacgttc
agcggaacggtcacgatcaacgacaacaacgacgacgtcgaagcgaacctgagcgtcact
ggattcagcggcgagaacggcaacactcaggaagcgtacagccagcaggcgctgaccatc
gacacgcaagaggacatcagcatcaattccgctgagacggccgacctgaacgacgacgga
accgtcgagacgatcaacgtcacgttcagtgacgctgtcgacgacagcaccgttctcacc
gcaatcgagaacgacgacttcaacctcaagtccgctaccgtcgaagacctcaacggtggc
gaagcgaacgacgcgacggtctcgctcgaagtctccggactcgggaacacggcggcgacg
gacgaactctcgctgttctcgaactccattgaggacaccgcgggtaaccccggtccgacg
actggtacgttcaagccggtcagtgacggcgcgaagcccgtcgtcaccgacgtgacgctg
aacgtcactgaactgaacgagtccgacgtgcctgccgacgtcgaagtcaacgtctcgttc
agcgagaagatgggcactgacccgtcggtcacgctcgtcggtctcagtcaaggcgacatc
acggcgtcgcccgcgagcgctgacgacggcgacgcgaacctgtccgcgacgactgtcagt
cagattgcagataacgacgaggacgtctcggtctacgtcaacgtctccgatggcgacgac
agcagcgggaacgctgtcgagacgtggaaccagagcgacctcaccgtcgacacgctcgcc
ccgagtgtcaccgtgaacaactcggaagcgcccgagggcgaaatcgtcagcggtgaactc
gacctctcgacgttcttcgacatctcggaggacgacgggggcgagacgacgtacctgatc
aacacgaccgccggcggctcgaactactccgaggtcaacgagcagttcgacacgaactcc
atcgacgacaccgcgcacctgaccgtgcgcgccgtcgacacggacaacgtcggcaacagc
gacaacgcgacgacggccgacatcaacgtcgacaacacggcaccgcaggtcaccattcag
agcccgtccgagacgacggctcgccagagcggtggcgtactcgacgtgaccgtcgacgtc
accgagcagaacctcgcagccgacaacgcgacgctcgtgctttcggatggcaacaagacc
atccagtacaacgcgtcgctgagcgacggttcgaacgaggtcgacctcctgctgaacacg
tccgagaacgcctcggatgcgtcggccatcgagccgaacctgtccgcgacgaacaccacg
ttcgacacgcagacggtctacgacctgtccgtgacggtcgacgactccacgggcaagtcc
acgaccgcgacgcagacggacgcgctgttcctcgacgacacggcgccggcgaacttcagc
ctcgtcgcgccgagcgaggcgaccgagtacgacccgacggtcgagggtgaagacgaactc
gtcgtttcctacggctacaccgaggacaacgtcgacaccgtgaccgtgtcgctcacgaac
gagagcggcgcagtcgcgaacgtcacagtcgacgagtcccagtacacggacgacggcgtc
atcaagagcttcgagctcgacctcgtcgactccttcgacaccggttcgctggccgacggt
cggtacaacgtctccgtgacggtgaccgacctcgccggcaacaagctcgtcgacaacacg
acgaacgcgccggtcgcgatcaacgccgagtcgccgtcggacggcacgccgtccttccag
ggcaccacgccgaccgcgacggcgtccatcggcgaggacccggagaacgtgacggtcgaa
gcgacctacaacgtctccgtgcccgaggtcactgacgcgggcgccatcgaggacccgcag
aactccctcgagaacgtcgacgtcaccgcacccaacgcgaccgtcgtcgtggactactac
gacgcgagtgagggcaagtacctcacgtacaccgaggaagtcgctgtcgacttctccggt
gagaacgcgaccgcgaacgcgaccatcaccgagagcgtgacggtcgacatcagtgacgtc
ggcccgtcgctcgacgacggtgaccgcgtgctcaagcggacggcgtcgctctccggcaac
gtcggcgtcgacgtcgaggcgtcctacgggaccgcctcgaacaccgacgctgtcgacacg
gggacgacgaccttcgtcgacaacgagacggtcgcgccgaccctcgacagcatcgaagtc
gacggtgacgtgagcgcgacgagcgacgaactcgtgctcacgttcgaccgtccggtgcag
gcgacggccgccggcatcactgccgacgacttcgcctacatcaacgagaacggcaacgtc
gacaactacgtgaccgcagtcagtggcgtcggtgacggcgacacccaagtcacggtcacg
ctgaacggtgctgtcgaagccggcgacgtcggctccgacatcgtcagcatccagcccgac
gtgctggagaacaccgaatcgccgaacaagaacgtgtccgcgacgagcgacacgttcgcg
gagaccaccgcgcccgtgctgacggacgcgacggtcggcgacgacgcgtcgacggtcacc
gtgaccttcgacgagcaggtgcaggccgcgaacggtagcgacctcaccgccgcgaacttc
agttactccggtagcgcgaacgtgacgagtgtgagccagacggccgacgacacggtcgtc
gtcaccctcgacgcgtccgtcacctccggagaaatcggcagcgccgaaatcgcggtcagc
gacgtgtacgaccgcttcggcaactccctcacggacagcacggcggtcaccgacggcacg
aagccgtccgacctccagattgtccagccgacccagcagaccaccgtgaagtccgacgac
ctcctcgacgtgacgtacggctacgtcgagaacgtcccggacaacgcggagacgaccgaa
atcacgctcaccgacaacgacggcacgtcgtacaccttcacggttgacgacacgcagtac
gtcgcgggcgtgaacaagaccgtcacgctcgacttgggtaacaagggcaccctcgaagac
ggtgcttaccacgtcgagattacggtcaccgacgcagacagtaacgaggacaccgtccag
accgaggacgccgtcgtcgtggtgaacgacgaggcgccgacggtcagtgacgtgtccatc
gcgagcgacacgtcggacatcgcgtccgactcgacgctgaacgtcacgtacgactacgac
ccggcaccgaacgcgacgagcgtcacggtgtgggttgtcgacagcgaggacgccgggaac
ttcacgtccggtgacctcgcgaacgcgtcgtacacgacctacgagaagtccgtcgaccac
ggcgtcgtcgacgaccgcaaactctccgtcgacctcggcggcgagattgcggacaacgac
gactacacggtcttcgtgaccgcgacggacgccgacgagatgcagagcgacgcggcgcag
gcgtcgagcacgctcgacgtgaacgccgagaagccgagcatcgaatccgtcgaagcgaac
gccggcagcgacacggtcacggtgcagttcaccgaggccgtcgtccccggcgacgatgac
gcgaacatcacgcgcgccgacttcgcgtaccagaacgtgaacggcgcgggagcgagcgcc
attgagtccgtcgccgtccacgacggcgacacggtgacgctcgagctcgacgccgaggtc
acgagcggtgacctcggcagcgaccacgtgaacgcccgcggtgggcagatcgtggacacc
gacggcgacaacgcgcgcgtcgtcggcaccgacgcggtcgcgctgtccgactcgacccag
ccgacggtcggctcggtcgacgcgggcgcaatcaacgcgaacaacgccgacagctacgac
gtgaccgtcgacacggggtcggaagtgaccgacgtctcggtgaccgtcaccgggtcgaac
ggcacgtccgtctccgacagcgcgacggcagtcacgggcgaggcgaccctcaccgtcaac
gctagcgcgctcgaagacggtagcgtcactgtcgacgtgacggtgaccgacgcggccggt
aacgaggcctcggcctcgcgcacggtcacgaaggacaccgacgcgccgaccatcgaatcc
gcgacgacgaacgcggggacgaacacggttacggtgacgttctccgaggacgtcactggc
gtctccgcgtccgcgctcggcatcacgagttcgagccacgaagtcatcgacgtcgtggac
gacggctcgtccgacgccaccgtgctggtggtgctgaacgagtcggtgcccgcggccgca
atcaacgacagcagtgtcgcccagattacggccgccggcgtcactgacgtggccggcaac
ccggtcgcgtcccagcagaagctgactgacgtggacgcgccgagcgtcatgagcgtcacc
gcggaccgcggcgacgagaacgtgaccatcacgttctccgagaacgtggacgcgggcgaa
gagggggcgctgaacgcctctgacttcgcgtacaccgacgcgaacgatgccggcgcgtcc
ggcatcgagtcggtgacccagaccggcccgcagacggtcgtcctcacgctgaacgggtcg
ctcacgccgagcgacatggccgaggacaccgtcggcatcgaggcggacagcgtgttcgac
tcggtcggtcacccggtcgctgcacacagcagcagtatcggtatcacttcggacgtcagc
gtgtcgacgaccgaggactcggtcacggtgactgtggtgtcgccgaacaacgtgtccacg
gccatcgactcgccgattacggtcgagaagaagtaccgcgagctcggttcgctcgaaggc
ttcgagctgaacgagcggtacacgaagacgctgaaggcgtccgacttcgagaaggtcgag
gccggcgtctacgaggcgacggtctcggtcgacgaggacggcgtctacgtggcgtccggt
acggtcgactcgatgatgatgtccgccgagggtatggtcgacgcggaagcgccgcacccg
accgacgcggtcatcacggacgtcaccagcgaagcgcaacttgacgacacgcgggacacc
acgcgcgttcgcgtgctgttcaacgaaccgatcgacgcgagcgaaatcctgccgagcgac
gtctccatcgaagggttcgacggagaggtcgtggcagtccagccggccggtccgctcggc
tcggtgacggtcgtcgtcgagggcaaggtccagacgggtgcgtaccccgacgtgaccatc
gacggtgacagttacacggacctcgccgggacggccggcgaggagggcggcgacacggtg
gtccacaccgacacgctcgacctctcgaagggccagaacttcgtgtccgtgcccgcagcg
agcggcgaactcgacctcgacgaactcgacacgtccgaggtcgacgccatctacgcgtac
gacgcagcgtcgaacgagtgggaggcgtacgaccccgacgcgaaggagaacgacttctcc
gcgctcgagggcggtgaagggtacgtcttcgtgatggacgaagccgcaaccctcgaagtg
aacgtgtacaacgtcgctggcgccgaggccggtgccgcggcgcccgcaccgaaccagcag
gaactgaccgaagggtggaacctcgtcggtcagttccaggagtacgaccagtcggtgacg
acggcgctgtcgtcgctgggcaacgactccgtctacagcgtgctctcgcaggacgagtcc
gcagacggcatcgcgtacgagtcctacggcgcgggagacttcgagacgatggagcgcggc
gaggcctactggctgttcgtgcaggacgacgaggtgtacaccgagtcgtctggccacacg
gtcgcggtctaa
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