Halobacterium litoreum: LT972_02910
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Entry
LT972_02910 CDS
T07867
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hlu
Halobacterium litoreum
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlu03016
]
LT972_02910
Enzymes [BR:
hlu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LT972_02910
Transfer RNA biogenesis [BR:
hlu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LT972_02910
Prokaryotic type
LT972_02910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UHH13957
LinkDB
All DBs
Position
complement(526978..527871)
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AA seq
297 aa
AA seq
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MLRDAPEDRDPDALFEFGVVNLDKPPGPSAHQVSAWVRDMVGVEKAAHAGTLDPKVTGCL
PVLTGAATRLAPALLEGPKEYVSVLELHADPPANLESVVEEFEGPTYQKPPRKSAVSRRL
RVREIYALDVLEVRDRQALLRITCESGTYIRKLCHDLGRALGTGAHMGHLRRTATTPFDD
TDLVTLHDLSDALAWYRDEDDTEPPEGDPEAALRDAIQPAERALEHLPSVTVARSAAREI
ADGAPVYAPGVLEADDADRDALVACYTPDGAAVCLGRLVGDPDADSGTVVDLERVLV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgacgcgcccgaggaccgcgacccggacgccctcttcgagttcggcgtggtg
aacctcgacaagccgcccggcccctccgcccaccaggtgtcggcgtgggtgcgggacatg
gtcggcgtcgagaaagccgcgcacgccggcacgctcgaccccaaagtgacgggctgtctc
cccgtcctcacgggcgcagcgacccgcctcgcgcccgcgctcctcgaaggcccgaaggag
tacgtctccgtcctcgaactccacgctgacccgcccgcgaatctcgaatccgtagtcgag
gagttcgagggcccgacctaccagaagccgccgcggaagtccgcggtgtcccgccgcctg
cgcgtccgcgaaatctacgccctcgacgtgctcgaagtacgggaccggcaagcactcctg
cgcatcacctgcgagtccggcacctacatccggaaactctgtcacgacctcggtcgcgcg
ctcggcaccggcgcccacatgggccacctccgccggacggctaccacgccgttcgacgac
accgacctcgtcaccctccacgacctctcggacgccctcgcgtggtaccgcgacgaggac
gacaccgaacccccggaaggcgaccccgaggccgcgctccgcgacgcgattcagcccgcc
gagcgcgcgctcgaacacctcccgagcgtcaccgtcgcgcgctccgccgcccgcgaaatc
gccgacggcgcacccgtctacgcccccggcgtcctcgaagccgacgacgccgaccgcgac
gccctcgtcgcgtgctacacccccgacggcgccgcggtctgcctcggccgcctcgtcggc
gaccccgacgccgactccggcacggtcgtcgacctcgaacgcgtcctcgtctag
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