KEGG   Halobacterium litoreum: LT972_04105
Entry
LT972_04105       CDS       T07867                                 
Name
(GenBank) AAA domain-containing protein
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
hlu  Halobacterium litoreum
Pathway
hlu03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hlu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LT972_04105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hlu03032]
    LT972_04105
Enzymes [BR:hlu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LT972_04105
DNA replication proteins [BR:hlu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LT972_04105
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LT972_04105
SSDB
Motif
Pfam: AAA_11 AAA_12 AAA_30 AAA_19 Dna2 PDDEXK_1 Viral_helicase1 ResIII UvrD-helicase AAA_16 AAA_22 SLFN-g3_helicase Cas_Cas4 DEAD UvrD_C_2 Helicase_RecD PIF1 nSTAND3 PhoH NPHP3_N AAA_25 SRP54 CbiA AAA PDZ Phage_SSB bpMoxR PDZ_2 AAA_24 AAA_7 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: UHH14188
LinkDB
Position
736540..739194
AA seq 884 aa
MNVRGEVTDVEGVRSVSTQYGEKDILEVRVRPESEGESVQVTLWGKWTETADYLDAGMDL
LVTDAEEKEWNGETQYSTSKESWVVVEPDFLVDVTNIREFVQCPRMYYLNKLQGLPLKYP
VTKGTIVHEVFGDLLRGRDLDDAIEERVSEAGLELGLLGREREEVEADVRANASAIEGWL
NQGKLTDEDGWRSEYTLVSERFGIKGRCDAIRRGMPVELKTGKNTNRDPRFHDKVQAACY
ALMLDERGVPADTGTLLYTKNAAVERNEETGDLSPAKEFSIGRGFLQFVVRERNHLAALE
ARDGPPTGYEADAKCEYCFEQDTCMVVSGRLDQESKAGQLGQPIPEEERVYFDEMYDAVE
RERASVHDEYRKLWEQSAEERADDDRAVIGLEPDDQTELGDGRWRLTADRPSSAASKIRE
GDRVLASDGDPVKGTAEMARVEVLDESRVEVTTDEPVELRRLDVYPSELNVDRMLTALHD
ALLKGDERRKDLLFDRASPDFEGEDHGLIPNNDAQNEAVNRALNAEDFALVHGPPGTGKT
YTIATLIRAFVERGDRVLLSAFTNRAVDNALEALREQGYDSIVRVGTENGVRPDMQDLRL
NKSGDPAERARALQSADVVAATTATCGSRVMREQEFDVVLVDEASQLTEPDTLAAVNRGD
RFVLVGDHEQLPPVVRSGGRLSKSLFQRLYETHPEASVLLDQQYRMSQRIQAFSSREFYD
GQLRPATGEVAGQRLADVGVETGGDEFVRDGVSFHDVPGTDDAHVDSEEGERVAEIVEAY
VDAGLAPGDVGVIAPFRAQVAEVGRLVPEGVAVDTVDRFQGSSKEVIVVSFVATGDLDGP
IFEDHRRVNVALSRAKKSLVLVGDEAALRSEPLYDRMVDWASIQ
NT seq 2655 nt   +upstreamnt  +downstreamnt
gtgaacgttcggggcgaggtcaccgacgtcgagggggttcggtcggtgagtacgcagtac
ggcgagaaggacattctggaggtccgagtgcgacccgagagcgagggcgagtccgtgcag
gtcacgctctgggggaagtggaccgagacggccgactacctcgacgccgggatggacctt
ctcgtgaccgacgccgaggaaaaggagtggaacggggagacgcagtattcgacgagcaag
gagtcgtgggtcgtcgtggagcccgacttcctcgtggacgtgacgaacatccgggagttc
gtgcagtgcccgcggatgtactacctgaacaaactccagggactcccgctcaaatacccc
gtcacgaaggggaccatcgtccacgaggtgttcggggacctgctccggggccgggatttg
gacgacgccatcgaggagcgcgtgagcgaggcgggcctcgaactcggcctgctcgggcgg
gagcgggaggaggtcgaggccgacgtgcgcgcgaacgcctcggccatcgagggctggctg
aaccaagggaaattgacggacgaggacggctggcgctcggagtacacgctggtctcggag
cgcttcggtatcaagggccggtgtgacgccatccggcgcgggatgccggtggaactgaag
acggggaagaacacgaaccgcgacccgcgcttccacgacaaggtgcaggcggcctgttac
gcgctgatgctcgacgagcgcggcgtcccggccgacaccggcacactcctctacacgaag
aacgcggccgtcgagcgcaacgaggagaccggcgacctctcgcccgccaaggagttctcc
atcggccgggggttcctccagttcgtcgtccgggagcgcaaccacctcgccgcgctcgaa
gcccgggacggcccgccgacgggctacgaggccgacgcgaagtgcgagtactgcttcgag
caggacacctgcatggtcgtctccggccgcctcgaccaggagtcgaaggcgggccaactc
ggtcagccgattcccgaggaagaacgcgtttacttcgacgagatgtacgacgcggtggaa
cgggagcgcgcgtcggtccacgacgagtaccggaaactctgggagcagtccgccgaggag
cgcgcggacgacgaccgcgccgtcatcggcctcgaacccgacgaccagaccgaactcggg
gacggccggtggcgactcaccgccgaccgcccgagcagcgccgcctcgaagattcgggag
ggcgaccgcgtactggcgtccgacggcgaccccgtgaagggcaccgcggagatggcgcgc
gtcgaagtcctcgacgagtcccgcgtcgaggtgacgaccgacgaaccggtcgaactccga
cggctggacgtctacccgtccgaactgaacgtcgacagaatgctgaccgcgctccacgac
gcgctcctcaaaggcgacgagcgccggaaggacctcctgttcgaccgcgcgagccccgac
ttcgagggcgaggaccacggcctgattccgaacaacgacgcgcaaaacgaggccgtgaac
cgggcgctgaacgccgaggacttcgcgctcgttcacggcccgccgggcaccgggaagacg
tacaccatcgccacgctgattcgggcgttcgtggagcgcggcgaccgcgtcctgctgtcc
gcgttcacgaaccgagccgtcgacaacgccctcgaagcgctccgcgagcaggggtacgat
agtatcgttcgcgtcggcaccgagaacggcgttcggcccgacatgcaggacctgcgcctg
aacaaatccggcgacccggcggagcgcgcgcgagcgctccagtccgccgacgtggtggcg
gcgaccaccgcgacgtgtggctcgcgggtgatgcgcgaacaggagttcgacgtggtgctc
gtcgacgaggcgagccaactcaccgaaccggacacgctcgccgccgtcaaccgcggcgac
cggttcgtgctcgtcggcgaccacgagcaactcccgcccgtcgtgcgctctggcggccgc
ctctcgaagtcgctgttccagcgactctacgagacccacccggaggcctcggtgctgctc
gaccagcagtaccggatgagccagcgcatccaggcgttctcctcgcgggagttctacgac
ggccaactgcgcccggcgaccggcgaggtggcgggccagcgactcgccgacgtgggcgtg
gagacgggcggagacgagttcgtccgcgacggggtgtccttccacgacgtgccgggcacc
gacgacgcgcacgtcgactccgaggagggcgagcgcgtcgctgaaatcgtcgaagcgtac
gtcgacgcagggctggctccgggagacgtcggcgtcatcgcgccgttccgcgcgcaagtg
gcggaagtcggccggctggtcccggagggcgtggcggtcgacacggtcgaccggttccag
ggctcctcgaaggaggtcatcgtcgtctccttcgtcgcgacgggcgacctcgacggcccc
atcttcgaggaccaccggcgcgtgaacgtcgcgctcagccgggcgaagaagagcctcgtg
ctcgtcggcgacgaggccgcgctgcggtcggaacccctctacgaccggatggtcgactgg
gcgagcatccagtag

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