Halobacterium litoreum: LT972_04165
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Entry
LT972_04165 CDS
T07867
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hlu
Halobacterium litoreum
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlu03009
]
LT972_04165
Ribosome biogenesis [BR:
hlu03009
]
Prokaryotic type
ribosomal protein modification factors
LT972_04165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
UHH14200
LinkDB
All DBs
Position
complement(753430..755127)
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AA seq
565 aa
AA seq
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MTVAVVGDGPAVEAVRAALGDADAAVESTDVAGVAGADLAVVVGVAGAGGFRAANDHARE
GGTPLIAVEVGGLGGQPLAGVDAGVSVLAPEGPCFECLAHRVAATDQERAASPSAERSAV
RLAGAHAGRFATDALAGDVVPGTVVELPHAERSLAPVPNCDCGDRPDRDVRRDAEPRSLD
AALAAAEPLVDDRIGLLTAVGERESFPAPYYLAMTSDTSGFSDADAAAQAAGVDADWNAA
YMKAVGEGLERYSAGVYRERDFESASADDENAVSPEAFVRPEGASASDALEWVRGEHLQT
GGDALLPADRVVFPPPEGSTGPAITTGLGLGNSGTEALLSGLYETVERDATMLSWYSTFD
PLGLAVDDDGFAELEKHAGAENLDVTALLCTQDVDVPVVAVAVHRDDWPRFALGSAADLD
ADAAARSALAEALQNWMELRAIGRDDAPEEDGAIGKYADFPREVRGFVDPDTTIAASDVG
PDDPPEGAAELDAVLDALADAGLDAYAARLTPRDVERAGFEAVRVLVPDAQPLFVDQPFF
GERAKEIPREMGFQPRLDKPFHPFP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgccgtcgtcggcgacgggcccgcggtggaggcggttcgtgccgcgctcggg
gacgccgacgcggccgtggaatcgaccgacgtggcgggcgtcgcgggcgcagacctcgcg
gtggtcgtcggcgtcgcgggcgcgggcggcttccgggccgcgaacgaccacgcgagagaa
ggtggcacgcccctcatcgccgtcgaagtgggcggcctcggcggccaaccgctggcgggc
gtggacgccggcgtctccgtcctcgcgccggaggggccgtgtttcgagtgtttggctcac
cgcgtcgccgccaccgaccaggagcgcgcggcgtcgccgtccgccgagcggtcggcggtc
cgcctcgccggcgcgcacgccggccgcttcgcgaccgacgcgctggccggcgacgtcgtc
cccgggaccgtcgtggaactcccgcacgccgagcgctcgctcgcgccggtgccgaactgc
gactgcggcgaccgccccgaccgcgacgtgcgccgggacgccgaaccccggagcctcgac
gccgcgctcgcagcggccgaaccgctcgtcgacgaccgaatcgggctgctgaccgcggtc
ggcgagcgcgagtcgttccccgcaccctactacctcgcgatgaccagcgacacctcgggg
ttcagcgacgccgacgccgccgcgcaggccgcgggcgtcgacgccgactggaacgccgcc
tacatgaaagccgtcggcgagggcctcgaacggtacagcgccggcgtctaccgcgaacgc
gacttcgagtcggcgtccgcggacgacgagaacgccgtctctcccgaggcgttcgtccgc
cccgagggcgcgagcgcgtcggacgcgctcgaatgggtgcgcggcgaacacctgcagacc
gggggcgacgcgctcctccccgccgaccgcgtcgtcttcccgccgcccgaggggtcgacc
ggccccgccatcacgaccggcctcggcctcggcaattcggggactgaagccctgctgtcg
gggctctacgagacagtcgaacgcgacgccacgatgctctcgtggtactcgacgttcgac
ccgctcggcctcgccgtcgacgacgacggcttcgccgaactcgagaagcacgccggcgcc
gagaacctcgacgtgacggccctgctctgcacgcaggacgtggacgtgcccgtggtcgcc
gtcgccgtccaccgcgacgactggccgcggttcgcgctcgggtccgccgccgacctcgac
gccgacgccgccgcgcgctccgcgctcgcggaagcgctccagaactggatggaactccgc
gctatcggccgcgacgacgccccagaggaggacggcgccatcggcaagtacgccgacttc
ccgcgcgaagtccgcggcttcgtcgaccccgacaccaccatcgccgcgagtgacgtgggc
ccggacgacccacccgagggcgccgccgaactcgacgccgtcctcgacgcgctcgcggac
gccggcctcgacgcctacgccgcccgcctcacgccccgggacgtagagcgcgccggcttc
gaagccgtccgcgtcctcgtgcccgacgcccaaccgctgttcgtcgaccagccgttcttc
ggcgagcgcgccaaggaaattccccgagagatggggttccagccgcggttagacaaaccg
ttccatcccttcccctga
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