Halobacterium litoreum: LT972_05595
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Entry
LT972_05595 CDS
T07867
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hlu
Halobacterium litoreum
Pathway
hlu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LT972_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlu03400
]
LT972_05595
Enzymes [BR:
hlu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LT972_05595
DNA repair and recombination proteins [BR:
hlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LT972_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
UHH14471
LinkDB
All DBs
Position
1012798..1013685
Genome browser
AA seq
295 aa
AA seq
DB search
MERGAIPVDDVPGAVDLQSTLESGQTYLWWRPDGATYETDGAYGGDAWYRTVVGDDVVEA
RQTEDAIEWRATTDAADLVRDLLGLRDDLREIRRAATEDDLAQAAWDAYDGLRIVRDPFF
GCLISFICSAQMRVERIFAMQESLRAEYGDPIDFDGETVYGFPRPETLAEATEDDLRDLK
LGYRAPYVQRTAEMVASGELTEEDVRGRAYELAREKLTGFVGVGDKVADCVLLFSLGYLE
AVPLDTWMQTAIEDHYPDCDRGNYADTSRAFRERLGPYAGYTQTYLFHYLRSGGE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcggcgcgattcccgtcgacgacgtgccgggcgcggtcgacctccagtccacg
ctggagagcggccagacgtacctctggtggcggcccgacggcgccacctacgagaccgac
ggcgcgtacggcggcgacgcctggtaccgcaccgtcgtcggcgacgacgtggtcgaagcc
cgacagaccgaggacgcaatcgagtggcgtgccacgacggacgccgccgacctcgttcgc
gacctgctcggcctccgcgacgacctccgcgagattcggcgcgccgccaccgaggacgac
ctcgcgcaggccgcgtgggacgcctacgacggcctccgaatcgtccgcgaccccttcttc
ggttgcctgatttcgttcatctgctcggcccagatgcgcgtcgaacgcatcttcgcgatg
caggagtccctgcgcgccgagtacggcgaccccatcgacttcgacggcgagacggtctac
ggcttcccgcgaccggagacgctcgccgaggccaccgaggacgacctccgcgacctgaaa
ctcggctaccgcgcgccctacgtccagcgcaccgccgagatggtcgcgtcgggcgaactc
accgaggaggacgtccggggtcgagcgtacgaactcgcgcgcgagaaactcacggggttc
gtcggcgtcggcgacaaagtcgcggactgcgtgctcctgttctcgctgggctacctcgaa
gccgtccccctcgacacgtggatgcagaccgccatcgaggaccactacccggactgcgac
cgcgggaactacgccgacacctcgcgggcgttccgcgagcgactggggccgtacgccggc
tatacacaaacctacctcttccactacctccggtcgggcggcgagtag
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