Halobacterium litoreum: LT972_06660
Help
Entry
LT972_06660 CDS
T07867
Name
(GenBank) PKD domain-containing protein
Organism
hlu
Halobacterium litoreum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
K319L-like_PKD
CARDB
ChitinaseA_N
DUF5640
PGF-CTERM
Gryzun
Big_3_3
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
UHH14676
LinkDB
All DBs
Position
complement(1202444..1206226)
Genome browser
AA seq
1260 aa
AA seq
DB search
MAMPESSLSRVAAVVAVVSFVVAAPIVGVVSFSGSSSAMQASTYAVAQGTTCATVSPVTD
TGQNVTEFYDYRNPYPDITGNPFALTYSSYGTTEYQETSGSVLFFYEGSEGASAVFLHDR
LGDEDGGSTLTMSFDDLPAGGEWVVQDDRYPERDDDWSLGGESATIDWKWGPNRTDGGAF
RGVGDLDGAIEITPGFNEDAAHWGDWGYSGTEETRVDSWTLVGADGSETGLDMDRRAFVH
SGPCLETPPSASVTAPDTTEEGDSVTIDASGTTDDEAVGGYEWDFDGDGETDRVTEDPAV
SRSFEEAGNYTVSVTAFDTYGNADTASTTIEVTVPQTPPDAVLDAPDTAVVNETVTLDAS
DSTDEGRITEYRWDFDGDGTVDLNTTDAEVEHAYTEPGDVTTVVTVVDDAGAVDAATADV
EVLAPNRPPNASLDAPAAVLEDETVTLDATGSTDDRGIETYEWDFDGDGEEDAQTDEPTI
DHTYEEPGNYTPTVQVVDEADEIDTATAEIEVVPVDDPPSAELDAPETATVGQPATFDAS
DSDDEEGIDSYRWDFDGDGQVDATTAGPTTEYAYTQTGTVDATVTVVDTGGQTANASATV
EVLPPDDPPTAALSAPANATVDEDVVFDASNSSDDRGVEVYRWDFDGDGEVDDETDDPAV
AHEYEGAGTYTATVTVVDTGGQTATASATVTVTGPPNADLAVPETAFVNETVTLDAGGST
DEGRITEYRWDFDGDDEVDSTTSSPTTTHVYNETDDYDVGVTVVDDDGNTDTVYEELEVD
EREFPPTAALSAPSRVTVDEPFTLDASASSDEDGSIETYEWDFDGDGDTDEETDEPTVEY
AYDDLGDVSPSVTVVDDDGLESTASATVTVGEPLPLDAEFAVETRDPTAGQSVSFDASAS
TPVADITSYSWTFGDGASASGQQPTHTYDSSGSYTVTLEVQNESGATATATQTVTVAARS
SGGGGNNGGGGNNGGGGNNGGGGNSGGGGNPGGGNSGGGGSPGGGGSPGGGSSGGGSSGG
GNSGGSSPPADTGDPEIGPANVTVEDRTLLVGDSIVVEATVSNTGDAPGTKTVEFEVEGD
QITSREVPLDPNETRTVTFTHRFTTPGNKTIEVDEGEKQYITVEPRVPNISVDSVDAGEQ
PVAAGEAFTLTAVVSNTGDAEGSERVQLELFGEVVAVENVSVAPGETRRVEFTRSIQAPG
DYEASVGNASVSIRVASDDTATTESTTTTSSSGDGVPGFGVAVALVAVLVAALAAARRET
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcccgagtcctcgctctcccgggtggccgcagtcgtggcagtggtatcgttc
gtcgtcgcggcgccgatagtcggcgtcgtgtcgttcagcgggtcgtcgtcggcgatgcag
gcgtcgacgtacgccgtcgcgcaggggacgacgtgcgcgacggtgagtccggtgacggac
accggccagaacgtcaccgagttctacgactaccggaacccctacccggacatcacgggg
aacccgttcgcgctgacgtacagctcctacggcacgacggagtaccaggagacgtcgggg
agcgtgctgttcttctacgaggggtctgagggcgcgagcgccgtgttcctccacgaccgc
ctcggcgacgaggacggcgggagcacgctgacgatgtccttcgacgacctgccggcgggc
ggcgagtgggtcgtacaggacgaccgctacccggagcgggacgacgactggagcctcggc
ggggagtccgcgaccatcgactggaagtgggggccgaaccgcaccgacggcggcgcgttc
cgcggcgtcggcgacctggacggcgccatcgaaatcacgcccggcttcaacgaggacgcc
gcgcactggggcgactggggctactcgggcacggaggagacgcgcgtcgacagttggacg
ctggtcggcgcggacggctcggagaccggcctcgacatggaccgtcgcgcgttcgtccac
agcgggccgtgtctggagacgccgccgtccgcgagcgtgacggcgcccgacaccacggag
gagggcgacagcgtcaccatcgacgcgagcgggacgaccgacgacgaggccgtcggcggc
tacgagtgggacttcgacggcgacggcgagaccgaccgcgtcaccgaggacccggcggtg
tcgcggtccttcgaggaggcgggcaactacacggtgtcggtgacggccttcgacacgtac
gggaacgcggacacggcgtccacgacaatcgaggtgaccgtgccacagacgccgccggac
gccgtcctcgacgcgcccgacacggcggtcgtgaacgagacggtgaccctggacgccagc
gactccaccgacgagggccggattaccgagtaccgctgggacttcgacggcgacggcacg
gtcgacctgaacacgaccgacgccgaggtcgagcacgcgtacaccgagccgggcgacgtg
accaccgtcgtcaccgtcgtggacgacgcgggcgcggttgacgcggcgaccgcggacgtg
gaagtgctggcgccgaaccggccgccgaacgcgagcctcgacgcgcccgcggcggtcctc
gaggacgagacggtgacactcgacgccaccgggtcgaccgacgaccgcggcatcgagacc
tacgagtgggacttcgacggcgacggcgaggaggacgcccagacggacgagccgactatc
gaccacacctacgaggagccgggtaactacacgccgaccgtacaggtggtggacgaggcc
gacgagatagacaccgcgaccgccgagatagaggtggtgcccgtcgacgacccgccgtcc
gccgaactcgacgcgccggagacggcgacggtcggacagccggcgacgttcgacgcgtcc
gacagcgacgacgaggagggcatcgactcgtaccgctgggacttcgacggcgacgggcag
gtggacgcgaccacggcgggccccacgaccgagtacgcgtacacgcagaccggcaccgtc
gacgcgacggtgaccgtcgtcgacaccggcggacagaccgcgaacgcgtccgcgaccgtg
gaggtgctgccgcctgacgacccgccgaccgcggcgctctccgcgccggcgaacgccacc
gtcgacgaggacgtggtgttcgacgcgagcaactcctcggacgaccgcggcgtcgaggtc
taccggtgggacttcgacggcgacggcgaggtcgacgacgagaccgacgaccccgcggtc
gcccacgagtacgagggcgcgggtacgtacacggcgacggtgacggtcgtggacaccggc
gggcagaccgccaccgcgtccgcgacggtgaccgtcaccggcccgccgaacgccgacctc
gcggtgcccgagacggcgttcgtcaacgagacggtgacactcgacgccggcggctccacc
gacgagggccggattaccgagtaccggtgggacttcgacggcgacgatgaggtggactcg
accacgtcctcgccgaccacgacccacgtctacaacgagaccgacgactacgacgtgggc
gtgactgtcgtggacgacgacggcaacacggacaccgtctacgaggaactcgaagtcgac
gagcgcgagttcccgccgactgcggcgctctccgcgccgagtcgcgtcaccgtcgacgag
ccgttcacgctggacgccagcgcctccagcgacgaggacgggagcatcgagacctacgag
tgggacttcgacggcgacggcgacaccgacgaggagaccgacgagccgaccgtcgagtac
gcctacgacgacctcggcgacgtgtcgccgagcgtgacggtcgtcgacgacgacggcctc
gaatcgactgcgagcgcgaccgtgacggtcggcgaaccgctcccgctcgacgccgagttc
gcggtcgagacccgcgacccgaccgccggtcagtccgtctcgttcgacgcgagcgcgtcc
acgcccgtcgcggacatcacgtcgtactcgtggacgttcggcgacggcgcgagcgcgtcc
ggccagcagcccacgcacacctacgactcgtccgggtcgtacacggtcacgctcgaagtg
cagaacgagtcgggcgcgaccgcgaccgccacccagaccgtcaccgtcgccgcgcgcagc
agcggtggcggcgggaacaacggcggcggcgggaacaacggcggcggtgggaacaacggc
ggtggcggcaacagcggtggcggcggtaatccgggcggcggcaacagcggtggcggtggg
agtccgggcggcggcggtagtccgggcggtgggagcagtggcggcggcagtagcggtggc
ggcaacagcggcggcagttcgccgcccgccgacaccggcgacccggaaatcgggccggcg
aacgtcaccgtcgaggaccgcacgctgctcgtcggcgactccatcgtcgtggaggcgacc
gtgtcgaacacgggcgacgcacccgggacgaagaccgtcgagttcgaggtcgagggcgac
cagattaccagccgcgaggtgccactcgacccgaacgagacgcgcaccgtgacgttcacc
caccggttcaccacgcccggcaacaagaccatcgaggtcgacgagggcgagaaacagtac
atcacggtcgaaccgcgggtgccgaacatctcggtcgacagcgtcgacgccggcgagcag
ccggtcgccgccggcgaagcgttcacgctcaccgccgtcgtgtcgaacaccggggacgcg
gagggcagcgagcgcgtgcaactcgaactgttcggcgaggtcgtcgccgtcgagaacgtc
tccgtggcgcccggcgagacgcggcgcgtggagttcacgcgctcgattcaggcgcccggc
gactacgaggcgtcggtcgggaacgcgtcggtgtcgattcgcgtcgccagcgacgacacc
gcgacgactgagtcgacgacgaccacgagttcgtccggcgatggcgtccccggcttcggc
gtcgccgtcgcgctggtggcggtgctggtggcggcgctcgcggcagcgagaagagagacg
tag
DBGET
integrated database retrieval system
