Halobacterium litoreum: LT972_07300
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Entry
LT972_07300 CDS
T07867
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hlu
Halobacterium litoreum
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlu03000
]
LT972_07300
Transcription factors [BR:
hlu03000
]
Prokaryotic type
Helix-turn-helix
Other families
LT972_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
GAF_2
GAF
Phage_integrase
GAF_3
HTH_20
Autoind_bind
Sigma70_r4
HTH_24
GerE
Motif
Other DBs
NCBI-ProteinID:
UHH14801
LinkDB
All DBs
Position
complement(1322034..1323845)
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AA seq
603 aa
AA seq
DB search
MSESPQSAVSLSTDDYRRLRRATETHREELVVRLAGEVGLRPAEVVRVRPSDATTHRRNG
VDHHLLCVPNGDGDTARRAYLPADVEHDLRQYARTAGVAADDPLVDVSARRVQMLVSEVA
DRAADRAGDPRLREASSQTLRAFFARRLLVDEGVDPRVVASVGGWSSLASLDQYLGDTDP
EPEAVADAFAPTALAPPDATAATATSSGPRFEAVFDRARAVADALDAASTREEVESRVCE
TLVEDGAYAAAWVGASRGEAVDVAAAADAGAPDGVGDGAVAAALRTERVHTTGDVGADAE
FAAWREHAERAGYRAAAAVPVVDGETTYGVLGVGADVGEFGERERALLADLGRRVGRALT
VVEQRKLLLADTVVEVAFETDAGRSFFARAAAEHGCELELDGVVPGEDQSLLYFVTLRGA
AAGDVLSWATDESAVDDARLVRDYGDEALLEVVLSGPDVAKALTERGATVRELVADADGQ
RVVGEVPADADVRALADDLAGAFPGVELVSKRERERSGETRGAFRASLHESLTDKQAAVL
QAAYHAGYFEWPRGSTAEELADAIGITSPTLHNHLRRAQQKLLTAFFEDDDPTLDAESPW
PDR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcgccgcagtccgcggtgtcgctgtcgacggacgactaccggcgactccgg
cgcgccaccgagacccaccgcgaggaactcgtcgtacgcctcgcgggcgaagtcggcctc
cggccggccgaagtcgtgcgcgtccgcccgtcggacgcgacgacccaccgccggaacggc
gtcgaccaccacctcctctgcgttccaaacggcgacggcgacaccgcgcggcgcgcgtac
ctcccggcggacgtcgaacacgacctgcgccagtacgcccgcaccgccggcgtcgcggcc
gacgacccgctcgtcgacgtctccgcgcgacgcgtgcagatgctcgtctcggaggtcgcc
gaccgcgccgccgaccgagcgggcgacccgcgactccgcgaggcgtcctcgcagacgctc
cgcgcgttcttcgcgcgccgactgctcgtcgacgagggcgtcgacccgcgcgtcgtcgcg
tccgtgggcgggtggtcgagtctcgcgagcctcgaccagtacctcggcgacaccgacccg
gagccggaggccgtcgctgacgcgttcgcgccgacggcgctcgcaccgccggacgcgacg
gcggcgacggccacgtcctccgggccgcgattcgaagcggtgttcgaccgcgctcgggcg
gtcgccgacgcgctcgacgcggcgtcgacccgcgaggaggtcgaatcccgagtctgcgag
acgctggtcgaggacggcgcgtacgcggcggcgtgggtcggcgcgtcgcgcggggaggcc
gtcgacgtcgcggcggccgcggacgccggtgcgcccgacggagtcggggacggcgcggtc
gcggcggcgctgcggaccgagcgcgtccacacgacgggggacgtcggcgccgacgccgag
ttcgcggcgtggcgcgagcacgccgagcgagcggggtaccgcgccgcggccgcggttccg
gtggtggacggcgagacgacgtacggcgtcctcggcgtcggcgccgacgtcggcgagttc
ggggagcgcgagcgcgcgctgctcgcggacctcgggcgtcgcgtcgggcgcgcgctgacg
gtcgtcgaacagcgcaagctcctgctcgcggacaccgtcgtggaggtcgcgttcgagacc
gacgccgggcgttcgtttttcgcgcgagcggcggccgagcacggctgcgaactcgaactc
gacggcgtggtgccgggcgaggaccagtcgctgctgtacttcgtgacgcttcgaggggcg
gccgcgggcgacgtgttgtcgtgggcgaccgacgagtcggcggtcgacgacgcccgcctc
gtccgagactacggggacgaggcgctcctcgaagtcgtgttgtcggggccggacgtggcg
aaggcgctgaccgaacgcggcgcgaccgtgcgggagttggtggccgacgcggacggtcag
cgcgtcgtcggcgaggtgcccgcggacgccgacgtgcgggcgctcgcggacgacttggcg
ggggcgttccccggcgtcgagctggtgtcgaaacgcgagcgggagcgctccggggagacg
cggggcgcgttccgggcgtcgctccacgagtcgctgaccgacaagcaggcggcggtgctg
caggcggcctaccacgccggctacttcgagtggccgcgcgggagcaccgcagaggagttg
gccgacgccatcggcatcacgtcgccgacgctccacaaccacctgcggcgcgcccagcag
aaactcctcaccgcgttcttcgaggacgacgacccgacgctcgacgcggagtcgccgtgg
cccgaccgctaa
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