Halobacterium litoreum: LT972_07950
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Entry
LT972_07950 CDS
T07867
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlu
Halobacterium litoreum
Pathway
hlu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT972_07950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_07950
Transcription machinery [BR:
hlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LT972_07950
Prokaryotic type
Archaeal type
TFB
LT972_07950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
A2L_zn_ribbon
Trm112p
Cas12f1-like_TNB
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
Cyclin_C
BRF2-like_C_cyclin_rpt
DUF8054_C
DZR
Zn_ribbon_3
Cyclin_N
HTH_24
Zn_ribbon_8
DUF7575
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UHH12088
LinkDB
All DBs
Position
complement(1445033..1446007)
Genome browser
AA seq
324 aa
AA seq
DB search
MRDTTTRESEQDADETEQSESADETQRCPECGGNLVVDEERGETVCEDCGLVVEEDSIDR
GPEWRAFDAAESDQKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGNALTGRQRRKMQRLRK
WNERFRTRSSKERNLKQALGEIERMASALGLPDNVRETASVIYRRALDDNLLPGRSIEGV
ATSALYAAARQANAPRSLDEVASVSRVERDEIARTYRYVARELGLEVAPTDPASYVPRFC
SELDLPDEVERRARELLDAAANAGITSGKSPVGLAAAAVYAASLLSNERITQSEVSDVAN
ISEVTIRNRYHEILEAGGEESVEA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacaccacgacccgcgaatcggaacaggacgccgacgagaccgaacagtccgag
tcggccgacgagacccagcgctgtccggagtgcggcggcaacctcgtcgtcgacgaggag
cgcggcgagacggtctgcgaggactgcgggctcgtcgtcgaggaggacagcatcgaccgc
gggcccgagtggcgcgccttcgacgccgccgagagcgaccagaagtcccgcgtcggcgcg
cccacgacgaacatgatgcacgacaaggggctgtcgacgaacatcggctggcagaacaag
gacgcctacgggaacgcgctcaccggccgccagcgccggaagatgcagcgactccggaag
tggaacgagcgcttccgcacccggagctccaaggagcgcaacctcaagcaggcgctcggc
gaaatcgaacgcatggcctccgcgctcggcctgccggacaacgtccgcgagaccgcctct
gtcatctaccgacgcgcgctcgacgacaacctcctccccggccggagcatcgagggcgtc
gcgacgagcgcgctgtacgccgccgcccggcaggccaacgccccgcggagcctcgacgag
gtggcgagcgtgagtcgcgtggagcgcgacgaaatcgcgcgcacctaccggtacgtcgcg
cgcgaactcggcctcgaagtcgcgcccaccgaccccgcgagttacgtcccgcgcttctgc
tcggaactcgacctcccggacgaggtcgagcggcgcgcacgcgaactcttagacgccgcc
gcgaacgccggcatcacctcggggaaatcgccggtcggcctcgccgccgccgccgtctac
gccgccagcctcctctcgaacgagcgcatcacgcagagcgaggtcagcgacgtcgcgaac
atctccgaggtcaccatccggaaccgttaccacgagattctggaggctggcggcgaggag
tccgtcgaagcgtaa
DBGET
integrated database retrieval system
